Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LSM2Q9Y333 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LSM2Q9Y333 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LSM2Q9Y333 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LSM2Q9Y333 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LSM2Q9Y333 RPS2P7-201ENST00000447334 885 ntBASIC19.97■□□□□ 0.79
LSM2Q9Y333 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LSM2Q9Y333 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
LSM2Q9Y333 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM2Q9Y333 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
LSM2Q9Y333 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM2Q9Y333 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LSM2Q9Y333 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM2Q9Y333 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LSM2Q9Y333 AL592295.1-201ENST00000400984 884 ntBASIC19.96■□□□□ 0.79
LSM2Q9Y333 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM2Q9Y333 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.96■□□□□ 0.79
LSM2Q9Y333 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.96■□□□□ 0.79
LSM2Q9Y333 AC022413.1-201ENST00000624602 984 ntBASIC19.96■□□□□ 0.79
LSM2Q9Y333 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LSM2Q9Y333 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
LSM2Q9Y333 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LSM2Q9Y333 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.96■□□□□ 0.79
LSM2Q9Y333 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM2Q9Y333 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM2Q9Y333 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM2Q9Y333 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LSM2Q9Y333 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSM2Q9Y333 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSM2Q9Y333 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSM2Q9Y333 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.95■□□□□ 0.78
LSM2Q9Y333 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
LSM2Q9Y333 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.95■□□□□ 0.78
LSM2Q9Y333 AC026310.3-201ENST00000625186 2373 ntBASIC19.95■□□□□ 0.78
LSM2Q9Y333 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LSM2Q9Y333 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
LSM2Q9Y333 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
LSM2Q9Y333 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSM2Q9Y333 SLC25A24-204ENST00000569674 2357 ntBASIC19.94■□□□□ 0.78
LSM2Q9Y333 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM2Q9Y333 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM2Q9Y333 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM2Q9Y333 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LSM2Q9Y333 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM2Q9Y333 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.94■□□□□ 0.78
LSM2Q9Y333 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LSM2Q9Y333 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.94■□□□□ 0.78
LSM2Q9Y333 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM2Q9Y333 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSM2Q9Y333 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LSM2Q9Y333 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.93■□□□□ 0.78
LSM2Q9Y333 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSM2Q9Y333 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LSM2Q9Y333 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.93■□□□□ 0.78
LSM2Q9Y333 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LSM2Q9Y333 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.92■□□□□ 0.78
LSM2Q9Y333 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LSM2Q9Y333 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.92■□□□□ 0.78
LSM2Q9Y333 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSM2Q9Y333 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.92■□□□□ 0.78
LSM2Q9Y333 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSM2Q9Y333 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LSM2Q9Y333 ABHD17AP4-201ENST00000411545 909 ntBASIC19.92■□□□□ 0.78
LSM2Q9Y333 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.92■□□□□ 0.78
LSM2Q9Y333 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSM2Q9Y333 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LSM2Q9Y333 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LSM2Q9Y333 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.92■□□□□ 0.78
LSM2Q9Y333 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
LSM2Q9Y333 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM2Q9Y333 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.91■□□□□ 0.78
LSM2Q9Y333 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
LSM2Q9Y333 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM2Q9Y333 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM2Q9Y333 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM2Q9Y333 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM2Q9Y333 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM2Q9Y333 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.91■□□□□ 0.78
LSM2Q9Y333 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LSM2Q9Y333 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
LSM2Q9Y333 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.91■□□□□ 0.78
LSM2Q9Y333 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LSM2Q9Y333 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.91■□□□□ 0.78
LSM2Q9Y333 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LSM2Q9Y333 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSM2Q9Y333 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSM2Q9Y333 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LSM2Q9Y333 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.9■□□□□ 0.78
LSM2Q9Y333 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSM2Q9Y333 AC087742.1-201ENST00000575880 1738 ntBASIC19.9■□□□□ 0.78
LSM2Q9Y333 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
LSM2Q9Y333 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LSM2Q9Y333 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSM2Q9Y333 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LSM2Q9Y333 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.89■□□□□ 0.77
LSM2Q9Y333 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LSM2Q9Y333 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.89■□□□□ 0.77
LSM2Q9Y333 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LSM2Q9Y333 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.89■□□□□ 0.77
LSM2Q9Y333 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms