Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC42.97■■■■■ 4.47
SHROOM4Q9ULL8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC42.97■■■■■ 4.47
SHROOM4Q9ULL8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC42.97■■■■■ 4.47
SHROOM4Q9ULL8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC42.97■■■■■ 4.47
SHROOM4Q9ULL8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC42.97■■■■■ 4.47
SHROOM4Q9ULL8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC42.96■■■■■ 4.47
SHROOM4Q9ULL8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC42.96■■■■■ 4.47
SHROOM4Q9ULL8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC42.96■■■■■ 4.47
SHROOM4Q9ULL8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC42.96■■■■■ 4.47
SHROOM4Q9ULL8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC42.96■■■■■ 4.47
SHROOM4Q9ULL8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC42.95■■■■■ 4.47
SHROOM4Q9ULL8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC42.95■■■■■ 4.47
SHROOM4Q9ULL8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC42.95■■■■■ 4.47
SHROOM4Q9ULL8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC42.95■■■■■ 4.47
SHROOM4Q9ULL8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC42.95■■■■■ 4.47
SHROOM4Q9ULL8 AC006015.1-201ENST00000429970 570 ntBASIC42.94■■■■■ 4.47
SHROOM4Q9ULL8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC42.94■■■■■ 4.46
SHROOM4Q9ULL8 AC138932.3-201ENST00000567634 1902 ntBASIC42.93■■■■■ 4.46
SHROOM4Q9ULL8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC42.93■■■■■ 4.46
SHROOM4Q9ULL8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC42.93■■■■■ 4.46
SHROOM4Q9ULL8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC42.93■■■■■ 4.46
SHROOM4Q9ULL8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC42.93■■■■■ 4.46
SHROOM4Q9ULL8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC42.93■■■■■ 4.46
SHROOM4Q9ULL8 AC126544.1-201ENST00000580842 1059 ntBASIC42.93■■■■■ 4.46
SHROOM4Q9ULL8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC42.93■■■■■ 4.46
SHROOM4Q9ULL8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC42.92■■■■■ 4.46
SHROOM4Q9ULL8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC42.92■■■■■ 4.46
SHROOM4Q9ULL8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC42.91■■■■■ 4.46
SHROOM4Q9ULL8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC42.91■■■■■ 4.46
SHROOM4Q9ULL8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC42.91■■■■■ 4.46
SHROOM4Q9ULL8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC42.91■■■■■ 4.46
SHROOM4Q9ULL8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC42.9■■■■■ 4.46
SHROOM4Q9ULL8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC42.9■■■■■ 4.46
SHROOM4Q9ULL8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC42.9■■■■■ 4.46
SHROOM4Q9ULL8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC42.9■■■■■ 4.46
SHROOM4Q9ULL8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC42.9■■■■■ 4.46
SHROOM4Q9ULL8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC42.9■■■■■ 4.46
SHROOM4Q9ULL8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC42.89■■■■■ 4.46
SHROOM4Q9ULL8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC42.89■■■■■ 4.46
SHROOM4Q9ULL8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC42.89■■■■■ 4.46
SHROOM4Q9ULL8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC42.88■■■■■ 4.46
SHROOM4Q9ULL8 NTF6G-201ENST00000591094 616 ntBASIC42.88■■■■■ 4.46
SHROOM4Q9ULL8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC42.88■■■■■ 4.46
SHROOM4Q9ULL8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC42.88■■■■■ 4.45
SHROOM4Q9ULL8 GXYLT1P2-201ENST00000433312 1230 ntBASIC42.87■■■■■ 4.45
SHROOM4Q9ULL8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC42.87■■■■■ 4.45
SHROOM4Q9ULL8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC42.87■■■■■ 4.45
SHROOM4Q9ULL8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC42.87■■■■■ 4.45
SHROOM4Q9ULL8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC42.87■■■■■ 4.45
SHROOM4Q9ULL8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC42.87■■■■■ 4.45
SHROOM4Q9ULL8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC42.87■■■■■ 4.45
SHROOM4Q9ULL8 MIR6084-201ENST00000622012 110 ntBASIC42.87■■■■■ 4.45
SHROOM4Q9ULL8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC42.86■■■■■ 4.45
SHROOM4Q9ULL8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC42.86■■■■■ 4.45
SHROOM4Q9ULL8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC42.86■■■■■ 4.45
SHROOM4Q9ULL8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC42.86■■■■■ 4.45
SHROOM4Q9ULL8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC42.86■■■■■ 4.45
SHROOM4Q9ULL8 AC104771.1-201ENST00000603335 964 ntBASIC42.86■■■■■ 4.45
SHROOM4Q9ULL8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC42.85■■■■■ 4.45
SHROOM4Q9ULL8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC42.85■■■■■ 4.45
SHROOM4Q9ULL8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC42.85■■■■■ 4.45
SHROOM4Q9ULL8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC42.85■■■■■ 4.45
SHROOM4Q9ULL8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC42.85■■■■■ 4.45
SHROOM4Q9ULL8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC42.84■■■■■ 4.45
SHROOM4Q9ULL8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC42.84■■■■■ 4.45
SHROOM4Q9ULL8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC42.84■■■■■ 4.45
SHROOM4Q9ULL8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC42.84■■■■■ 4.45
SHROOM4Q9ULL8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC42.84■■■■■ 4.45
SHROOM4Q9ULL8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC42.84■■■■■ 4.45
SHROOM4Q9ULL8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC42.84■■■■■ 4.45
SHROOM4Q9ULL8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC42.83■■■■■ 4.45
SHROOM4Q9ULL8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC42.83■■■■■ 4.45
SHROOM4Q9ULL8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC42.83■■■■■ 4.45
SHROOM4Q9ULL8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC42.83■■■■■ 4.45
SHROOM4Q9ULL8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC42.82■■■■■ 4.45
SHROOM4Q9ULL8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC42.82■■■■■ 4.45
SHROOM4Q9ULL8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC42.82■■■■■ 4.45
SHROOM4Q9ULL8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC42.82■■■■■ 4.45
SHROOM4Q9ULL8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC42.82■■■■■ 4.45
SHROOM4Q9ULL8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC42.82■■■■■ 4.44
SHROOM4Q9ULL8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC42.82■■■■■ 4.44
SHROOM4Q9ULL8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC42.81■■■■■ 4.44
SHROOM4Q9ULL8 ALDH1A3-203ENST00000557963 1670 ntBASIC42.81■■■■■ 4.44
SHROOM4Q9ULL8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC42.81■■■■■ 4.44
SHROOM4Q9ULL8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC42.81■■■■■ 4.44
SHROOM4Q9ULL8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC42.81■■■■■ 4.44
SHROOM4Q9ULL8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC42.81■■■■■ 4.44
SHROOM4Q9ULL8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC42.81■■■■■ 4.44
SHROOM4Q9ULL8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC42.81■■■■■ 4.44
SHROOM4Q9ULL8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC42.81■■■■■ 4.44
SHROOM4Q9ULL8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC42.81■■■■■ 4.44
SHROOM4Q9ULL8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC42.81■■■■■ 4.44
SHROOM4Q9ULL8 AC073111.5-205ENST00000641717 521 ntBASIC42.81■■■■■ 4.44
SHROOM4Q9ULL8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC42.8■■■■■ 4.44
SHROOM4Q9ULL8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC42.8■■■■■ 4.44
SHROOM4Q9ULL8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC42.8■■■■■ 4.44
SHROOM4Q9ULL8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC42.8■■■■■ 4.44
SHROOM4Q9ULL8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC42.8■■■■■ 4.44
SHROOM4Q9ULL8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC42.8■■■■■ 4.44
SHROOM4Q9ULL8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC42.8■■■■■ 4.44
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms