Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
NCDNQ9UBB6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NCDNQ9UBB6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
NCDNQ9UBB6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
NCDNQ9UBB6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.35■■□□□ 1.17
NCDNQ9UBB6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NCDNQ9UBB6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NCDNQ9UBB6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NCDNQ9UBB6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
NCDNQ9UBB6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NCDNQ9UBB6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.34■■□□□ 1.17
NCDNQ9UBB6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NCDNQ9UBB6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NCDNQ9UBB6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NCDNQ9UBB6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NCDNQ9UBB6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.33■■□□□ 1.17
NCDNQ9UBB6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.33■■□□□ 1.17
NCDNQ9UBB6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
NCDNQ9UBB6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.33■■□□□ 1.17
NCDNQ9UBB6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
NCDNQ9UBB6 CROCCP5-201ENST00000436658 830 ntBASIC22.33■■□□□ 1.17
NCDNQ9UBB6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.33■■□□□ 1.17
NCDNQ9UBB6 AL499627.2-201ENST00000606283 725 ntBASIC22.33■■□□□ 1.17
NCDNQ9UBB6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.33■■□□□ 1.17
NCDNQ9UBB6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NCDNQ9UBB6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
NCDNQ9UBB6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.33■■□□□ 1.16
NCDNQ9UBB6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
NCDNQ9UBB6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NCDNQ9UBB6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
NCDNQ9UBB6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.32■■□□□ 1.16
NCDNQ9UBB6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.32■■□□□ 1.16
NCDNQ9UBB6 NCF1B-203ENST00000435988 1254 ntBASIC22.32■■□□□ 1.16
NCDNQ9UBB6 AP005435.1-201ENST00000529293 1178 ntBASIC22.32■■□□□ 1.16
NCDNQ9UBB6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NCDNQ9UBB6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NCDNQ9UBB6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.32■■□□□ 1.16
NCDNQ9UBB6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.32■■□□□ 1.16
NCDNQ9UBB6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
NCDNQ9UBB6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
NCDNQ9UBB6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NCDNQ9UBB6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NCDNQ9UBB6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NCDNQ9UBB6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.32■■□□□ 1.16
NCDNQ9UBB6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
NCDNQ9UBB6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
NCDNQ9UBB6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NCDNQ9UBB6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NCDNQ9UBB6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
NCDNQ9UBB6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NCDNQ9UBB6 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.31■■□□□ 1.16
NCDNQ9UBB6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NCDNQ9UBB6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.31■■□□□ 1.16
NCDNQ9UBB6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.3■■□□□ 1.16
NCDNQ9UBB6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NCDNQ9UBB6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.3■■□□□ 1.16
NCDNQ9UBB6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NCDNQ9UBB6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.3■■□□□ 1.16
NCDNQ9UBB6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
NCDNQ9UBB6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NCDNQ9UBB6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
NCDNQ9UBB6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NCDNQ9UBB6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.3■■□□□ 1.16
NCDNQ9UBB6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.3■■□□□ 1.16
NCDNQ9UBB6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.3■■□□□ 1.16
NCDNQ9UBB6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NCDNQ9UBB6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NCDNQ9UBB6 AC141586.4-201ENST00000624558 1573 ntBASIC22.29■■□□□ 1.16
NCDNQ9UBB6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NCDNQ9UBB6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NCDNQ9UBB6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
NCDNQ9UBB6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NCDNQ9UBB6 GPX1P1-201ENST00000388829 606 ntBASIC22.29■■□□□ 1.16
NCDNQ9UBB6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.29■■□□□ 1.16
NCDNQ9UBB6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.29■■□□□ 1.16
NCDNQ9UBB6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NCDNQ9UBB6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
NCDNQ9UBB6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
NCDNQ9UBB6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NCDNQ9UBB6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.28■■□□□ 1.16
NCDNQ9UBB6 MIR663A-201ENST00000385250 93 ntBASIC22.28■■□□□ 1.16
NCDNQ9UBB6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
NCDNQ9UBB6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
NCDNQ9UBB6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NCDNQ9UBB6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.28■■□□□ 1.16
NCDNQ9UBB6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.28■■□□□ 1.16
NCDNQ9UBB6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
NCDNQ9UBB6 AC105233.4-201ENST00000642045 216 ntBASIC22.28■■□□□ 1.16
NCDNQ9UBB6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
NCDNQ9UBB6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NCDNQ9UBB6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
NCDNQ9UBB6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NCDNQ9UBB6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.28■■□□□ 1.16
NCDNQ9UBB6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.27■■□□□ 1.16
NCDNQ9UBB6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
NCDNQ9UBB6 AC096887.2-201ENST00000623443 1957 ntBASIC22.27■■□□□ 1.16
NCDNQ9UBB6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.27■■□□□ 1.16
NCDNQ9UBB6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NCDNQ9UBB6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.27■■□□□ 1.16
NCDNQ9UBB6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms