Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
TFCP2L1Q9NZI6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
TFCP2L1Q9NZI6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC28.78■■■□□ 2.2
TFCP2L1Q9NZI6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC28.78■■■□□ 2.2
TFCP2L1Q9NZI6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
TFCP2L1Q9NZI6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
TFCP2L1Q9NZI6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC28.77■■■□□ 2.2
TFCP2L1Q9NZI6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
TFCP2L1Q9NZI6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC28.77■■■□□ 2.2
TFCP2L1Q9NZI6 DBI-210ENST00000542275 757 ntTSL 5 BASIC28.77■■■□□ 2.2
TFCP2L1Q9NZI6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC28.77■■■□□ 2.2
TFCP2L1Q9NZI6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
TFCP2L1Q9NZI6 AC105233.4-201ENST00000642045 216 ntBASIC28.77■■■□□ 2.2
TFCP2L1Q9NZI6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
TFCP2L1Q9NZI6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC28.76■■■□□ 2.19
TFCP2L1Q9NZI6 MIR6089-201ENST00000616698 64 ntBASIC28.76■■■□□ 2.19
TFCP2L1Q9NZI6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC28.76■■■□□ 2.19
TFCP2L1Q9NZI6 AC066615.1-201ENST00000640911 628 ntBASIC28.76■■■□□ 2.19
TFCP2L1Q9NZI6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
TFCP2L1Q9NZI6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
TFCP2L1Q9NZI6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
TFCP2L1Q9NZI6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.75■■■□□ 2.19
TFCP2L1Q9NZI6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
TFCP2L1Q9NZI6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
TFCP2L1Q9NZI6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC28.75■■■□□ 2.19
TFCP2L1Q9NZI6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC28.75■■■□□ 2.19
TFCP2L1Q9NZI6 CROCCP5-201ENST00000436658 830 ntBASIC28.75■■■□□ 2.19
TFCP2L1Q9NZI6 BID-214ENST00000617586 542 ntTSL 5 BASIC28.75■■■□□ 2.19
TFCP2L1Q9NZI6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC28.75■■■□□ 2.19
TFCP2L1Q9NZI6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC28.75■■■□□ 2.19
TFCP2L1Q9NZI6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
TFCP2L1Q9NZI6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
TFCP2L1Q9NZI6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC28.75■■■□□ 2.19
TFCP2L1Q9NZI6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC28.75■■■□□ 2.19
TFCP2L1Q9NZI6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC28.75■■■□□ 2.19
TFCP2L1Q9NZI6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
TFCP2L1Q9NZI6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
TFCP2L1Q9NZI6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
TFCP2L1Q9NZI6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC28.74■■■□□ 2.19
TFCP2L1Q9NZI6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC28.74■■■□□ 2.19
TFCP2L1Q9NZI6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
TFCP2L1Q9NZI6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC28.74■■■□□ 2.19
TFCP2L1Q9NZI6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC28.74■■■□□ 2.19
TFCP2L1Q9NZI6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC28.73■■■□□ 2.19
TFCP2L1Q9NZI6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
TFCP2L1Q9NZI6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.73■■■□□ 2.19
TFCP2L1Q9NZI6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC28.73■■■□□ 2.19
TFCP2L1Q9NZI6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC28.73■■■□□ 2.19
TFCP2L1Q9NZI6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC28.73■■■□□ 2.19
TFCP2L1Q9NZI6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
TFCP2L1Q9NZI6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
TFCP2L1Q9NZI6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
TFCP2L1Q9NZI6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
TFCP2L1Q9NZI6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
TFCP2L1Q9NZI6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
TFCP2L1Q9NZI6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
TFCP2L1Q9NZI6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC28.72■■■□□ 2.19
TFCP2L1Q9NZI6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
TFCP2L1Q9NZI6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC28.72■■■□□ 2.19
TFCP2L1Q9NZI6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
TFCP2L1Q9NZI6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC28.72■■■□□ 2.19
TFCP2L1Q9NZI6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
TFCP2L1Q9NZI6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
TFCP2L1Q9NZI6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
TFCP2L1Q9NZI6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
TFCP2L1Q9NZI6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TFCP2L1Q9NZI6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
TFCP2L1Q9NZI6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TFCP2L1Q9NZI6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TFCP2L1Q9NZI6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
TFCP2L1Q9NZI6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC28.71■■■□□ 2.19
TFCP2L1Q9NZI6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC28.71■■■□□ 2.19
TFCP2L1Q9NZI6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TFCP2L1Q9NZI6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TFCP2L1Q9NZI6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TFCP2L1Q9NZI6 AL121749.1-202ENST00000609313 2153 ntBASIC28.71■■■□□ 2.19
TFCP2L1Q9NZI6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.71■■■□□ 2.19
TFCP2L1Q9NZI6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
TFCP2L1Q9NZI6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.19
TFCP2L1Q9NZI6 NCF1B-203ENST00000435988 1254 ntBASIC28.7■■■□□ 2.18
TFCP2L1Q9NZI6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
TFCP2L1Q9NZI6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC28.7■■■□□ 2.18
TFCP2L1Q9NZI6 OR2I1P-207ENST00000453522 948 ntBASIC28.7■■■□□ 2.18
TFCP2L1Q9NZI6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC28.7■■■□□ 2.18
TFCP2L1Q9NZI6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
TFCP2L1Q9NZI6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC28.69■■■□□ 2.18
TFCP2L1Q9NZI6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC28.69■■■□□ 2.18
TFCP2L1Q9NZI6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
TFCP2L1Q9NZI6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
TFCP2L1Q9NZI6 CD99P1-205ENST00000527459 561 ntBASIC28.69■■■□□ 2.18
TFCP2L1Q9NZI6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
TFCP2L1Q9NZI6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
TFCP2L1Q9NZI6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
TFCP2L1Q9NZI6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
TFCP2L1Q9NZI6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC28.69■■■□□ 2.18
TFCP2L1Q9NZI6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC28.68■■■□□ 2.18
TFCP2L1Q9NZI6 COX20-201ENST00000366528 568 ntTSL 2 BASIC28.68■■■□□ 2.18
TFCP2L1Q9NZI6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC28.68■■■□□ 2.18
TFCP2L1Q9NZI6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
TFCP2L1Q9NZI6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms