Protein–RNA interactions for Protein: Q9BWW7

SCRT1, Transcriptional repressor scratch 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1Q9BWW7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCRT1Q9BWW7 C11orf96-202ENST00000528572 1834 ntBASIC17.93■□□□□ 0.46
SCRT1Q9BWW7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCRT1Q9BWW7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCRT1Q9BWW7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SCRT1Q9BWW7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCRT1Q9BWW7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCRT1Q9BWW7 AC026202.3-201ENST00000600805 1127 ntBASIC17.93■□□□□ 0.46
SCRT1Q9BWW7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCRT1Q9BWW7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCRT1Q9BWW7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCRT1Q9BWW7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.93■□□□□ 0.46
SCRT1Q9BWW7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCRT1Q9BWW7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
SCRT1Q9BWW7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCRT1Q9BWW7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.92■□□□□ 0.46
SCRT1Q9BWW7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCRT1Q9BWW7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCRT1Q9BWW7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SCRT1Q9BWW7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCRT1Q9BWW7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.92■□□□□ 0.46
SCRT1Q9BWW7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SCRT1Q9BWW7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCRT1Q9BWW7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCRT1Q9BWW7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCRT1Q9BWW7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCRT1Q9BWW7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.92■□□□□ 0.46
SCRT1Q9BWW7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.92■□□□□ 0.46
SCRT1Q9BWW7 AC139530.1-201ENST00000575312 1977 ntBASIC17.91■□□□□ 0.46
SCRT1Q9BWW7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.91■□□□□ 0.46
SCRT1Q9BWW7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCRT1Q9BWW7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCRT1Q9BWW7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCRT1Q9BWW7 GPX1-201ENST00000419349 1106 ntBASIC17.91■□□□□ 0.46
SCRT1Q9BWW7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SCRT1Q9BWW7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCRT1Q9BWW7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCRT1Q9BWW7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCRT1Q9BWW7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SCRT1Q9BWW7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.9■□□□□ 0.46
SCRT1Q9BWW7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCRT1Q9BWW7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCRT1Q9BWW7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SCRT1Q9BWW7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCRT1Q9BWW7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.9■□□□□ 0.46
SCRT1Q9BWW7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCRT1Q9BWW7 KRT18P10-201ENST00000388836 1287 ntBASIC17.9■□□□□ 0.46
SCRT1Q9BWW7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.9■□□□□ 0.46
SCRT1Q9BWW7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SCRT1Q9BWW7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.9■□□□□ 0.46
SCRT1Q9BWW7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCRT1Q9BWW7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCRT1Q9BWW7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCRT1Q9BWW7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCRT1Q9BWW7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
SCRT1Q9BWW7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SCRT1Q9BWW7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.89■□□□□ 0.45
SCRT1Q9BWW7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCRT1Q9BWW7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SCRT1Q9BWW7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCRT1Q9BWW7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.89■□□□□ 0.45
SCRT1Q9BWW7 RNF165-205ENST00000588679 2904 ntBASIC17.89■□□□□ 0.45
SCRT1Q9BWW7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCRT1Q9BWW7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCRT1Q9BWW7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.89■□□□□ 0.45
SCRT1Q9BWW7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.88■□□□□ 0.45
SCRT1Q9BWW7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SCRT1Q9BWW7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCRT1Q9BWW7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SCRT1Q9BWW7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCRT1Q9BWW7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SCRT1Q9BWW7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCRT1Q9BWW7 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.88■□□□□ 0.45
SCRT1Q9BWW7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCRT1Q9BWW7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.88■□□□□ 0.45
SCRT1Q9BWW7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCRT1Q9BWW7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCRT1Q9BWW7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.88■□□□□ 0.45
SCRT1Q9BWW7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCRT1Q9BWW7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
SCRT1Q9BWW7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SCRT1Q9BWW7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SCRT1Q9BWW7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCRT1Q9BWW7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCRT1Q9BWW7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.87■□□□□ 0.45
SCRT1Q9BWW7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCRT1Q9BWW7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCRT1Q9BWW7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCRT1Q9BWW7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCRT1Q9BWW7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.87■□□□□ 0.45
SCRT1Q9BWW7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCRT1Q9BWW7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCRT1Q9BWW7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCRT1Q9BWW7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCRT1Q9BWW7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCRT1Q9BWW7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCRT1Q9BWW7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SCRT1Q9BWW7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.87■□□□□ 0.45
SCRT1Q9BWW7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SCRT1Q9BWW7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms