Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPPED1Q9BRF8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPPED1Q9BRF8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPPED1Q9BRF8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPPED1Q9BRF8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.1■□□□□ 0.97
CPPED1Q9BRF8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.1■□□□□ 0.97
CPPED1Q9BRF8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CPPED1Q9BRF8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPPED1Q9BRF8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CPPED1Q9BRF8 AL353803.4-201ENST00000565882 1934 ntBASIC21.1■□□□□ 0.97
CPPED1Q9BRF8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CPPED1Q9BRF8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.09■□□□□ 0.97
CPPED1Q9BRF8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPPED1Q9BRF8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPPED1Q9BRF8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.09■□□□□ 0.97
CPPED1Q9BRF8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPPED1Q9BRF8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CPPED1Q9BRF8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.09■□□□□ 0.97
CPPED1Q9BRF8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPPED1Q9BRF8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.09■□□□□ 0.97
CPPED1Q9BRF8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPPED1Q9BRF8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CPPED1Q9BRF8 AC137767.1-201ENST00000602918 1920 ntBASIC21.09■□□□□ 0.97
CPPED1Q9BRF8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.09■□□□□ 0.97
CPPED1Q9BRF8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPPED1Q9BRF8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPPED1Q9BRF8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.08■□□□□ 0.97
CPPED1Q9BRF8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.08■□□□□ 0.97
CPPED1Q9BRF8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPPED1Q9BRF8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPPED1Q9BRF8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.08■□□□□ 0.97
CPPED1Q9BRF8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.08■□□□□ 0.97
CPPED1Q9BRF8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.08■□□□□ 0.97
CPPED1Q9BRF8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CPPED1Q9BRF8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CPPED1Q9BRF8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CPPED1Q9BRF8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CPPED1Q9BRF8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.08■□□□□ 0.96
CPPED1Q9BRF8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CPPED1Q9BRF8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
CPPED1Q9BRF8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CPPED1Q9BRF8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPPED1Q9BRF8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPPED1Q9BRF8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.07■□□□□ 0.96
CPPED1Q9BRF8 BHLHE23-202ENST00000612929 1109 ntBASIC21.07■□□□□ 0.96
CPPED1Q9BRF8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.07■□□□□ 0.96
CPPED1Q9BRF8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPPED1Q9BRF8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPPED1Q9BRF8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPPED1Q9BRF8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPPED1Q9BRF8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPPED1Q9BRF8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CPPED1Q9BRF8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPPED1Q9BRF8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
CPPED1Q9BRF8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPPED1Q9BRF8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPPED1Q9BRF8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPPED1Q9BRF8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.06■□□□□ 0.96
CPPED1Q9BRF8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPPED1Q9BRF8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPPED1Q9BRF8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.06■□□□□ 0.96
CPPED1Q9BRF8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPPED1Q9BRF8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.06■□□□□ 0.96
CPPED1Q9BRF8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPPED1Q9BRF8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPPED1Q9BRF8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.06■□□□□ 0.96
CPPED1Q9BRF8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.05■□□□□ 0.96
CPPED1Q9BRF8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPPED1Q9BRF8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPPED1Q9BRF8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPPED1Q9BRF8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPPED1Q9BRF8 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.05■□□□□ 0.96
CPPED1Q9BRF8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPPED1Q9BRF8 AC004987.1-201ENST00000428627 508 ntBASIC21.05■□□□□ 0.96
CPPED1Q9BRF8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.05■□□□□ 0.96
CPPED1Q9BRF8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CPPED1Q9BRF8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPPED1Q9BRF8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPPED1Q9BRF8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.05■□□□□ 0.96
CPPED1Q9BRF8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPPED1Q9BRF8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPPED1Q9BRF8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CPPED1Q9BRF8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CPPED1Q9BRF8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPPED1Q9BRF8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPPED1Q9BRF8 ATP5G2P3-201ENST00000429083 425 ntBASIC21.04■□□□□ 0.96
CPPED1Q9BRF8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.04■□□□□ 0.96
CPPED1Q9BRF8 AC074183.2-201ENST00000623112 922 ntBASIC21.04■□□□□ 0.96
CPPED1Q9BRF8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPPED1Q9BRF8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CPPED1Q9BRF8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPPED1Q9BRF8 AC139530.1-201ENST00000575312 1977 ntBASIC21.04■□□□□ 0.96
CPPED1Q9BRF8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPPED1Q9BRF8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPPED1Q9BRF8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPPED1Q9BRF8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPPED1Q9BRF8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.03■□□□□ 0.96
CPPED1Q9BRF8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPPED1Q9BRF8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPPED1Q9BRF8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms