Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
S1PR3Q99500 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
S1PR3Q99500 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
S1PR3Q99500 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.42■□□□□ 0.54
S1PR3Q99500 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
S1PR3Q99500 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
S1PR3Q99500 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.42■□□□□ 0.54
S1PR3Q99500 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
S1PR3Q99500 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.42■□□□□ 0.54
S1PR3Q99500 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
S1PR3Q99500 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.42■□□□□ 0.54
S1PR3Q99500 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
S1PR3Q99500 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.41■□□□□ 0.54
S1PR3Q99500 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
S1PR3Q99500 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
S1PR3Q99500 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
S1PR3Q99500 KRT125P-201ENST00000546827 989 ntBASIC18.41■□□□□ 0.54
S1PR3Q99500 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.41■□□□□ 0.54
S1PR3Q99500 AL035685.1-201ENST00000636663 812 ntBASIC18.41■□□□□ 0.54
S1PR3Q99500 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
S1PR3Q99500 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
S1PR3Q99500 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
S1PR3Q99500 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
S1PR3Q99500 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
S1PR3Q99500 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
S1PR3Q99500 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
S1PR3Q99500 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
S1PR3Q99500 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
S1PR3Q99500 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.4■□□□□ 0.54
S1PR3Q99500 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
S1PR3Q99500 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.4■□□□□ 0.54
S1PR3Q99500 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.4■□□□□ 0.54
S1PR3Q99500 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.4■□□□□ 0.54
S1PR3Q99500 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.4■□□□□ 0.54
S1PR3Q99500 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
S1PR3Q99500 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
S1PR3Q99500 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
S1PR3Q99500 AC021242.3-201ENST00000607598 1377 ntBASIC18.4■□□□□ 0.54
S1PR3Q99500 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
S1PR3Q99500 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
S1PR3Q99500 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
S1PR3Q99500 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
S1PR3Q99500 AC239859.2-201ENST00000444165 318 ntBASIC18.39■□□□□ 0.53
S1PR3Q99500 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.39■□□□□ 0.53
S1PR3Q99500 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
S1PR3Q99500 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
S1PR3Q99500 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.39■□□□□ 0.53
S1PR3Q99500 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
S1PR3Q99500 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
S1PR3Q99500 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
S1PR3Q99500 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
S1PR3Q99500 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.38■□□□□ 0.53
S1PR3Q99500 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
S1PR3Q99500 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
S1PR3Q99500 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
S1PR3Q99500 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.38■□□□□ 0.53
S1PR3Q99500 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.38■□□□□ 0.53
S1PR3Q99500 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
S1PR3Q99500 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
S1PR3Q99500 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.38■□□□□ 0.53
S1PR3Q99500 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
S1PR3Q99500 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
S1PR3Q99500 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
S1PR3Q99500 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
S1PR3Q99500 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.37■□□□□ 0.53
S1PR3Q99500 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.36■□□□□ 0.53
S1PR3Q99500 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.36■□□□□ 0.53
S1PR3Q99500 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
S1PR3Q99500 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
S1PR3Q99500 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.36■□□□□ 0.53
S1PR3Q99500 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
S1PR3Q99500 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
S1PR3Q99500 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
S1PR3Q99500 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
S1PR3Q99500 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.36■□□□□ 0.53
S1PR3Q99500 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
S1PR3Q99500 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
S1PR3Q99500 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
S1PR3Q99500 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.36■□□□□ 0.53
S1PR3Q99500 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
S1PR3Q99500 MIR4787-201ENST00000607364 84 ntBASIC18.36■□□□□ 0.53
S1PR3Q99500 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.36■□□□□ 0.53
S1PR3Q99500 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
S1PR3Q99500 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.35■□□□□ 0.53
S1PR3Q99500 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
S1PR3Q99500 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
S1PR3Q99500 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.35■□□□□ 0.53
S1PR3Q99500 AC005703.6-201ENST00000623265 1329 ntBASIC18.35■□□□□ 0.53
S1PR3Q99500 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
S1PR3Q99500 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
S1PR3Q99500 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.35■□□□□ 0.53
S1PR3Q99500 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
S1PR3Q99500 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.35■□□□□ 0.53
S1PR3Q99500 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.35■□□□□ 0.53
S1PR3Q99500 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
S1PR3Q99500 MIR6722-201ENST00000617286 78 ntBASIC18.35■□□□□ 0.53
S1PR3Q99500 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
S1PR3Q99500 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
S1PR3Q99500 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
S1PR3Q99500 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms