Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RNF183Q96D59 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF183Q96D59 MIR935-201ENST00000401179 91 ntBASIC16.47■□□□□ 0.23
RNF183Q96D59 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF183Q96D59 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF183Q96D59 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF183Q96D59 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RNF183Q96D59 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF183Q96D59 AC241377.3-202ENST00000626088 1088 ntBASIC16.47■□□□□ 0.23
RNF183Q96D59 AC241585.3-202ENST00000628937 1088 ntBASIC16.47■□□□□ 0.23
RNF183Q96D59 AC245100.8-202ENST00000629247 1058 ntBASIC16.47■□□□□ 0.23
RNF183Q96D59 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RNF183Q96D59 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF183Q96D59 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF183Q96D59 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF183Q96D59 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF183Q96D59 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF183Q96D59 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF183Q96D59 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.46■□□□□ 0.23
RNF183Q96D59 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
RNF183Q96D59 AC024257.2-201ENST00000549699 147 ntBASIC16.46■□□□□ 0.23
RNF183Q96D59 AC099791.2-201ENST00000605725 427 ntBASIC16.46■□□□□ 0.23
RNF183Q96D59 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF183Q96D59 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF183Q96D59 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF183Q96D59 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF183Q96D59 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.22
RNF183Q96D59 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF183Q96D59 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF183Q96D59 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF183Q96D59 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF183Q96D59 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF183Q96D59 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF183Q96D59 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF183Q96D59 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF183Q96D59 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF183Q96D59 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF183Q96D59 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.45■□□□□ 0.22
RNF183Q96D59 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF183Q96D59 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF183Q96D59 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF183Q96D59 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF183Q96D59 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF183Q96D59 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF183Q96D59 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF183Q96D59 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF183Q96D59 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF183Q96D59 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF183Q96D59 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF183Q96D59 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF183Q96D59 EDA-201ENST00000338901 1233 ntBASIC16.44■□□□□ 0.22
RNF183Q96D59 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.44■□□□□ 0.22
RNF183Q96D59 AC142381.2-201ENST00000566120 298 ntBASIC16.44■□□□□ 0.22
RNF183Q96D59 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF183Q96D59 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF183Q96D59 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.44■□□□□ 0.22
RNF183Q96D59 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF183Q96D59 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RNF183Q96D59 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF183Q96D59 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF183Q96D59 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RNF183Q96D59 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF183Q96D59 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF183Q96D59 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF183Q96D59 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF183Q96D59 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF183Q96D59 AL138724.1-201ENST00000606771 1088 ntBASIC16.43■□□□□ 0.22
RNF183Q96D59 AL355001.2-201ENST00000620617 1191 ntBASIC16.43■□□□□ 0.22
RNF183Q96D59 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF183Q96D59 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RNF183Q96D59 AL139125.2-201ENST00000623134 1869 ntBASIC16.43■□□□□ 0.22
RNF183Q96D59 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF183Q96D59 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF183Q96D59 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF183Q96D59 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF183Q96D59 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF183Q96D59 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF183Q96D59 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF183Q96D59 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF183Q96D59 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RNF183Q96D59 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF183Q96D59 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF183Q96D59 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RNF183Q96D59 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF183Q96D59 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF183Q96D59 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF183Q96D59 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RNF183Q96D59 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF183Q96D59 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF183Q96D59 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RNF183Q96D59 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF183Q96D59 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF183Q96D59 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF183Q96D59 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF183Q96D59 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF183Q96D59 SERBP1P1-201ENST00000396021 1160 ntBASIC16.41■□□□□ 0.22
RNF183Q96D59 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.41■□□□□ 0.22
RNF183Q96D59 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.41■□□□□ 0.22
RNF183Q96D59 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF183Q96D59 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms