Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VPS33AQ96AX1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VPS33AQ96AX1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.47■■□□□ 1.03
VPS33AQ96AX1 DUX4L18-201ENST00000553347 1267 ntBASIC21.47■■□□□ 1.03
VPS33AQ96AX1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VPS33AQ96AX1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
VPS33AQ96AX1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.47■■□□□ 1.03
VPS33AQ96AX1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.46■■□□□ 1.03
VPS33AQ96AX1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
VPS33AQ96AX1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS33AQ96AX1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VPS33AQ96AX1 AC019171.1-201ENST00000601251 1056 ntBASIC21.46■■□□□ 1.03
VPS33AQ96AX1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.46■■□□□ 1.03
VPS33AQ96AX1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
VPS33AQ96AX1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
VPS33AQ96AX1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
VPS33AQ96AX1 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.45■■□□□ 1.02
VPS33AQ96AX1 AC022616.5-201ENST00000518796 181 ntBASIC21.45■■□□□ 1.02
VPS33AQ96AX1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.45■■□□□ 1.02
VPS33AQ96AX1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS33AQ96AX1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
VPS33AQ96AX1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
VPS33AQ96AX1 PKD1P6-201ENST00000343738 4769 ntBASIC21.45■■□□□ 1.02
VPS33AQ96AX1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
VPS33AQ96AX1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.44■■□□□ 1.02
VPS33AQ96AX1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.44■■□□□ 1.02
VPS33AQ96AX1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VPS33AQ96AX1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
VPS33AQ96AX1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.44■■□□□ 1.02
VPS33AQ96AX1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.44■■□□□ 1.02
VPS33AQ96AX1 AC139795.1-202ENST00000500444 432 ntBASIC21.44■■□□□ 1.02
VPS33AQ96AX1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS33AQ96AX1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS33AQ96AX1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.44■■□□□ 1.02
VPS33AQ96AX1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS33AQ96AX1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
VPS33AQ96AX1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
VPS33AQ96AX1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
VPS33AQ96AX1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.43■■□□□ 1.02
VPS33AQ96AX1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS33AQ96AX1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.43■■□□□ 1.02
VPS33AQ96AX1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS33AQ96AX1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS33AQ96AX1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS33AQ96AX1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS33AQ96AX1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
VPS33AQ96AX1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS33AQ96AX1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.43■■□□□ 1.02
VPS33AQ96AX1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VPS33AQ96AX1 AC120024.1-201ENST00000562672 995 ntBASIC21.43■■□□□ 1.02
VPS33AQ96AX1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
VPS33AQ96AX1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS33AQ96AX1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS33AQ96AX1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS33AQ96AX1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS33AQ96AX1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
VPS33AQ96AX1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS33AQ96AX1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
VPS33AQ96AX1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
VPS33AQ96AX1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.42■■□□□ 1.02
VPS33AQ96AX1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VPS33AQ96AX1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
VPS33AQ96AX1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.42■■□□□ 1.02
VPS33AQ96AX1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.42■■□□□ 1.02
VPS33AQ96AX1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
VPS33AQ96AX1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.42■■□□□ 1.02
VPS33AQ96AX1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.42■■□□□ 1.02
VPS33AQ96AX1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
VPS33AQ96AX1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
VPS33AQ96AX1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VPS33AQ96AX1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
VPS33AQ96AX1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
VPS33AQ96AX1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
VPS33AQ96AX1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
VPS33AQ96AX1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
VPS33AQ96AX1 AF131216.4-201ENST00000638924 1588 ntBASIC21.41■■□□□ 1.02
VPS33AQ96AX1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
VPS33AQ96AX1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
VPS33AQ96AX1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
VPS33AQ96AX1 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.41■■□□□ 1.02
VPS33AQ96AX1 AC127496.7-201ENST00000625110 1798 ntBASIC21.41■■□□□ 1.02
VPS33AQ96AX1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
VPS33AQ96AX1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
VPS33AQ96AX1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VPS33AQ96AX1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
VPS33AQ96AX1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
VPS33AQ96AX1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
VPS33AQ96AX1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.4■■□□□ 1.02
VPS33AQ96AX1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
VPS33AQ96AX1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
VPS33AQ96AX1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
VPS33AQ96AX1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VPS33AQ96AX1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.39■■□□□ 1.01
VPS33AQ96AX1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
VPS33AQ96AX1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VPS33AQ96AX1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.39■■□□□ 1.01
VPS33AQ96AX1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
VPS33AQ96AX1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.39■■□□□ 1.01
VPS33AQ96AX1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.39■■□□□ 1.01
VPS33AQ96AX1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms