Protein–RNA interactions for Protein: Q96A99

PTX4, Pentraxin-4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4Q96A99 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.14■□□□□ 0.65
PTX4Q96A99 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.14■□□□□ 0.65
PTX4Q96A99 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.14■□□□□ 0.65
PTX4Q96A99 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PTX4Q96A99 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.14■□□□□ 0.65
PTX4Q96A99 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTX4Q96A99 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTX4Q96A99 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTX4Q96A99 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
PTX4Q96A99 C11orf96-202ENST00000528572 1834 ntBASIC19.14■□□□□ 0.65
PTX4Q96A99 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTX4Q96A99 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTX4Q96A99 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTX4Q96A99 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTX4Q96A99 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTX4Q96A99 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PTX4Q96A99 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PTX4Q96A99 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.13■□□□□ 0.65
PTX4Q96A99 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.13■□□□□ 0.65
PTX4Q96A99 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTX4Q96A99 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
PTX4Q96A99 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTX4Q96A99 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.13■□□□□ 0.65
PTX4Q96A99 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTX4Q96A99 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTX4Q96A99 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTX4Q96A99 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTX4Q96A99 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PTX4Q96A99 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.12■□□□□ 0.65
PTX4Q96A99 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTX4Q96A99 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PTX4Q96A99 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PTX4Q96A99 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTX4Q96A99 DUX4L9-201ENST00000449051 1259 ntBASIC19.12■□□□□ 0.65
PTX4Q96A99 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.12■□□□□ 0.65
PTX4Q96A99 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTX4Q96A99 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.12■□□□□ 0.65
PTX4Q96A99 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PTX4Q96A99 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PTX4Q96A99 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTX4Q96A99 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTX4Q96A99 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTX4Q96A99 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTX4Q96A99 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTX4Q96A99 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTX4Q96A99 RARRES2P2-201ENST00000394842 485 ntBASIC19.11■□□□□ 0.65
PTX4Q96A99 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PTX4Q96A99 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.11■□□□□ 0.65
PTX4Q96A99 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.11■□□□□ 0.65
PTX4Q96A99 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PTX4Q96A99 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.11■□□□□ 0.65
PTX4Q96A99 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PTX4Q96A99 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.11■□□□□ 0.65
PTX4Q96A99 AC007375.3-201ENST00000600936 2314 ntBASIC19.11■□□□□ 0.65
PTX4Q96A99 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.11■□□□□ 0.65
PTX4Q96A99 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTX4Q96A99 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PTX4Q96A99 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PTX4Q96A99 AL353803.4-201ENST00000565882 1934 ntBASIC19.1■□□□□ 0.65
PTX4Q96A99 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTX4Q96A99 AC019171.1-201ENST00000601251 1056 ntBASIC19.1■□□□□ 0.65
PTX4Q96A99 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTX4Q96A99 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.1■□□□□ 0.65
PTX4Q96A99 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTX4Q96A99 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PTX4Q96A99 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
PTX4Q96A99 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTX4Q96A99 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.09■□□□□ 0.65
PTX4Q96A99 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.09■□□□□ 0.65
PTX4Q96A99 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.09■□□□□ 0.65
PTX4Q96A99 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.09■□□□□ 0.65
PTX4Q96A99 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.09■□□□□ 0.65
PTX4Q96A99 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTX4Q96A99 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTX4Q96A99 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTX4Q96A99 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTX4Q96A99 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTX4Q96A99 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.08■□□□□ 0.65
PTX4Q96A99 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTX4Q96A99 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTX4Q96A99 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PTX4Q96A99 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PTX4Q96A99 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.08■□□□□ 0.64
PTX4Q96A99 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTX4Q96A99 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTX4Q96A99 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.07■□□□□ 0.64
PTX4Q96A99 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTX4Q96A99 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PTX4Q96A99 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTX4Q96A99 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTX4Q96A99 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTX4Q96A99 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.07■□□□□ 0.64
PTX4Q96A99 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTX4Q96A99 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTX4Q96A99 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTX4Q96A99 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTX4Q96A99 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTX4Q96A99 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTX4Q96A99 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTX4Q96A99 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms