Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PTCD2Q8WV60 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PTCD2Q8WV60 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.68■■□□□ 1.22
PTCD2Q8WV60 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.68■■□□□ 1.22
PTCD2Q8WV60 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.68■■□□□ 1.22
PTCD2Q8WV60 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PTCD2Q8WV60 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
PTCD2Q8WV60 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.68■■□□□ 1.22
PTCD2Q8WV60 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.67■■□□□ 1.22
PTCD2Q8WV60 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
PTCD2Q8WV60 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PTCD2Q8WV60 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PTCD2Q8WV60 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.67■■□□□ 1.22
PTCD2Q8WV60 MIR4466-201ENST00000606121 54 ntBASIC22.67■■□□□ 1.22
PTCD2Q8WV60 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
PTCD2Q8WV60 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.67■■□□□ 1.22
PTCD2Q8WV60 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PTCD2Q8WV60 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.67■■□□□ 1.22
PTCD2Q8WV60 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
PTCD2Q8WV60 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PTCD2Q8WV60 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.67■■□□□ 1.22
PTCD2Q8WV60 AC133561.1-201ENST00000568600 2415 ntBASIC22.67■■□□□ 1.22
PTCD2Q8WV60 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PTCD2Q8WV60 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.67■■□□□ 1.22
PTCD2Q8WV60 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.66■■□□□ 1.22
PTCD2Q8WV60 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
PTCD2Q8WV60 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
PTCD2Q8WV60 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
PTCD2Q8WV60 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
PTCD2Q8WV60 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PTCD2Q8WV60 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.66■■□□□ 1.22
PTCD2Q8WV60 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.66■■□□□ 1.22
PTCD2Q8WV60 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.66■■□□□ 1.22
PTCD2Q8WV60 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.66■■□□□ 1.22
PTCD2Q8WV60 AL512631.2-201ENST00000604634 923 ntBASIC22.66■■□□□ 1.22
PTCD2Q8WV60 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.66■■□□□ 1.22
PTCD2Q8WV60 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PTCD2Q8WV60 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PTCD2Q8WV60 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.65■■□□□ 1.22
PTCD2Q8WV60 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.65■■□□□ 1.22
PTCD2Q8WV60 AL356740.2-201ENST00000601559 647 ntBASIC22.65■■□□□ 1.22
PTCD2Q8WV60 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PTCD2Q8WV60 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PTCD2Q8WV60 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PTCD2Q8WV60 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PTCD2Q8WV60 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
PTCD2Q8WV60 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PTCD2Q8WV60 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PTCD2Q8WV60 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
PTCD2Q8WV60 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PTCD2Q8WV60 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.64■■□□□ 1.21
PTCD2Q8WV60 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
PTCD2Q8WV60 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PTCD2Q8WV60 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PTCD2Q8WV60 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PTCD2Q8WV60 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.64■■□□□ 1.21
PTCD2Q8WV60 AC079630.1-202ENST00000618127 1840 ntBASIC22.64■■□□□ 1.21
PTCD2Q8WV60 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PTCD2Q8WV60 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
PTCD2Q8WV60 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
PTCD2Q8WV60 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
PTCD2Q8WV60 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.63■■□□□ 1.21
PTCD2Q8WV60 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.63■■□□□ 1.21
PTCD2Q8WV60 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.63■■□□□ 1.21
PTCD2Q8WV60 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PTCD2Q8WV60 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PTCD2Q8WV60 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
PTCD2Q8WV60 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
PTCD2Q8WV60 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.63■■□□□ 1.21
PTCD2Q8WV60 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.63■■□□□ 1.21
PTCD2Q8WV60 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.62■■□□□ 1.21
PTCD2Q8WV60 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PTCD2Q8WV60 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PTCD2Q8WV60 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.62■■□□□ 1.21
PTCD2Q8WV60 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PTCD2Q8WV60 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PTCD2Q8WV60 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PTCD2Q8WV60 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.62■■□□□ 1.21
PTCD2Q8WV60 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PTCD2Q8WV60 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PTCD2Q8WV60 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
PTCD2Q8WV60 AC005703.6-201ENST00000623265 1329 ntBASIC22.61■■□□□ 1.21
PTCD2Q8WV60 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PTCD2Q8WV60 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PTCD2Q8WV60 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PTCD2Q8WV60 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PTCD2Q8WV60 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PTCD2Q8WV60 AL136116.3-201ENST00000402907 1138 ntBASIC22.61■■□□□ 1.21
PTCD2Q8WV60 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.61■■□□□ 1.21
PTCD2Q8WV60 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PTCD2Q8WV60 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PTCD2Q8WV60 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PTCD2Q8WV60 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PTCD2Q8WV60 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PTCD2Q8WV60 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
PTCD2Q8WV60 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PTCD2Q8WV60 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.6■■□□□ 1.21
PTCD2Q8WV60 C9orf163-202ENST00000624034 2573 ntBASIC22.6■■□□□ 1.21
PTCD2Q8WV60 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PTCD2Q8WV60 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms