Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCHCR1Q8TD31 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.26■■□□□ 1.31
CCHCR1Q8TD31 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCHCR1Q8TD31 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCHCR1Q8TD31 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCHCR1Q8TD31 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCHCR1Q8TD31 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CCHCR1Q8TD31 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCHCR1Q8TD31 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.25■■□□□ 1.31
CCHCR1Q8TD31 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.25■■□□□ 1.31
CCHCR1Q8TD31 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.25■■□□□ 1.31
CCHCR1Q8TD31 AL035685.1-201ENST00000636663 812 ntBASIC23.25■■□□□ 1.31
CCHCR1Q8TD31 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.25■■□□□ 1.31
CCHCR1Q8TD31 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCHCR1Q8TD31 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCHCR1Q8TD31 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.24■■□□□ 1.31
CCHCR1Q8TD31 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CCHCR1Q8TD31 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCHCR1Q8TD31 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.24■■□□□ 1.31
CCHCR1Q8TD31 Z92544.1-202ENST00000571933 1220 ntBASIC23.24■■□□□ 1.31
CCHCR1Q8TD31 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCHCR1Q8TD31 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
CCHCR1Q8TD31 AL024507.2-201ENST00000606070 2574 ntBASIC23.23■■□□□ 1.31
CCHCR1Q8TD31 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCHCR1Q8TD31 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCHCR1Q8TD31 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.23■■□□□ 1.31
CCHCR1Q8TD31 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCHCR1Q8TD31 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.23■■□□□ 1.31
CCHCR1Q8TD31 KRT125P-201ENST00000546827 989 ntBASIC23.23■■□□□ 1.31
CCHCR1Q8TD31 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCHCR1Q8TD31 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCHCR1Q8TD31 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCHCR1Q8TD31 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.23■■□□□ 1.31
CCHCR1Q8TD31 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.22■■□□□ 1.31
CCHCR1Q8TD31 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CCHCR1Q8TD31 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCHCR1Q8TD31 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CCHCR1Q8TD31 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.22■■□□□ 1.31
CCHCR1Q8TD31 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.22■■□□□ 1.31
CCHCR1Q8TD31 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CCHCR1Q8TD31 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.22■■□□□ 1.31
CCHCR1Q8TD31 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCHCR1Q8TD31 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCHCR1Q8TD31 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCHCR1Q8TD31 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CCHCR1Q8TD31 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCHCR1Q8TD31 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.21■■□□□ 1.31
CCHCR1Q8TD31 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.21■■□□□ 1.31
CCHCR1Q8TD31 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCHCR1Q8TD31 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCHCR1Q8TD31 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.21■■□□□ 1.31
CCHCR1Q8TD31 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.21■■□□□ 1.31
CCHCR1Q8TD31 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCHCR1Q8TD31 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.21■■□□□ 1.31
CCHCR1Q8TD31 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCHCR1Q8TD31 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCHCR1Q8TD31 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.21■■□□□ 1.31
CCHCR1Q8TD31 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCHCR1Q8TD31 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCHCR1Q8TD31 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.2■■□□□ 1.3
CCHCR1Q8TD31 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.2■■□□□ 1.3
CCHCR1Q8TD31 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCHCR1Q8TD31 AF131216.4-201ENST00000638924 1588 ntBASIC23.2■■□□□ 1.3
CCHCR1Q8TD31 AC239859.2-201ENST00000444165 318 ntBASIC23.2■■□□□ 1.3
CCHCR1Q8TD31 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCHCR1Q8TD31 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCHCR1Q8TD31 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCHCR1Q8TD31 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCHCR1Q8TD31 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCHCR1Q8TD31 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCHCR1Q8TD31 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCHCR1Q8TD31 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CCHCR1Q8TD31 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCHCR1Q8TD31 GUSBP5-202ENST00000510805 1989 ntBASIC23.19■■□□□ 1.3
CCHCR1Q8TD31 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCHCR1Q8TD31 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCHCR1Q8TD31 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCHCR1Q8TD31 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCHCR1Q8TD31 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.18■■□□□ 1.3
CCHCR1Q8TD31 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCHCR1Q8TD31 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCHCR1Q8TD31 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CCHCR1Q8TD31 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCHCR1Q8TD31 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CCHCR1Q8TD31 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.18■■□□□ 1.3
CCHCR1Q8TD31 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCHCR1Q8TD31 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCHCR1Q8TD31 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCHCR1Q8TD31 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCHCR1Q8TD31 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CCHCR1Q8TD31 AC021242.3-201ENST00000607598 1377 ntBASIC23.17■■□□□ 1.3
CCHCR1Q8TD31 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCHCR1Q8TD31 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CCHCR1Q8TD31 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.17■■□□□ 1.3
CCHCR1Q8TD31 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.17■■□□□ 1.3
CCHCR1Q8TD31 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCHCR1Q8TD31 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCHCR1Q8TD31 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CCHCR1Q8TD31 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCHCR1Q8TD31 ESRRAP2-201ENST00000418437 1549 ntBASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms