Protein–RNA interactions for Protein: Q8NG06

TRIM58, E3 ubiquitin-protein ligase TRIM58, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58Q8NG06 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM58Q8NG06 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM58Q8NG06 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.8■■□□□ 1.4
TRIM58Q8NG06 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM58Q8NG06 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.8■■□□□ 1.4
TRIM58Q8NG06 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM58Q8NG06 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM58Q8NG06 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM58Q8NG06 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.79■■□□□ 1.4
TRIM58Q8NG06 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM58Q8NG06 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.79■■□□□ 1.4
TRIM58Q8NG06 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM58Q8NG06 AC007375.3-201ENST00000600936 2314 ntBASIC23.79■■□□□ 1.4
TRIM58Q8NG06 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.79■■□□□ 1.4
TRIM58Q8NG06 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM58Q8NG06 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM58Q8NG06 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM58Q8NG06 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.78■■□□□ 1.4
TRIM58Q8NG06 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM58Q8NG06 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM58Q8NG06 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM58Q8NG06 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM58Q8NG06 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.78■■□□□ 1.4
TRIM58Q8NG06 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM58Q8NG06 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM58Q8NG06 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM58Q8NG06 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TRIM58Q8NG06 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM58Q8NG06 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TRIM58Q8NG06 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM58Q8NG06 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM58Q8NG06 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM58Q8NG06 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM58Q8NG06 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
TRIM58Q8NG06 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.76■■□□□ 1.39
TRIM58Q8NG06 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.76■■□□□ 1.39
TRIM58Q8NG06 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM58Q8NG06 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM58Q8NG06 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM58Q8NG06 AC022616.5-201ENST00000518796 181 ntBASIC23.76■■□□□ 1.39
TRIM58Q8NG06 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.76■■□□□ 1.39
TRIM58Q8NG06 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM58Q8NG06 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.76■■□□□ 1.39
TRIM58Q8NG06 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
TRIM58Q8NG06 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM58Q8NG06 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.76■■□□□ 1.39
TRIM58Q8NG06 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
TRIM58Q8NG06 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM58Q8NG06 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM58Q8NG06 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM58Q8NG06 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.75■■□□□ 1.39
TRIM58Q8NG06 AC139530.1-201ENST00000575312 1977 ntBASIC23.75■■□□□ 1.39
TRIM58Q8NG06 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
TRIM58Q8NG06 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.75■■□□□ 1.39
TRIM58Q8NG06 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM58Q8NG06 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
TRIM58Q8NG06 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM58Q8NG06 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM58Q8NG06 AC092053.2-201ENST00000640557 1818 ntBASIC23.75■■□□□ 1.39
TRIM58Q8NG06 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
TRIM58Q8NG06 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM58Q8NG06 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM58Q8NG06 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM58Q8NG06 AL353803.4-201ENST00000565882 1934 ntBASIC23.74■■□□□ 1.39
TRIM58Q8NG06 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.74■■□□□ 1.39
TRIM58Q8NG06 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM58Q8NG06 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM58Q8NG06 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM58Q8NG06 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
TRIM58Q8NG06 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.74■■□□□ 1.39
TRIM58Q8NG06 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM58Q8NG06 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM58Q8NG06 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.73■■□□□ 1.39
TRIM58Q8NG06 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.73■■□□□ 1.39
TRIM58Q8NG06 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM58Q8NG06 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.73■■□□□ 1.39
TRIM58Q8NG06 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM58Q8NG06 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIM58Q8NG06 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
TRIM58Q8NG06 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.72■■□□□ 1.39
TRIM58Q8NG06 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
TRIM58Q8NG06 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.72■■□□□ 1.39
TRIM58Q8NG06 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.72■■□□□ 1.39
TRIM58Q8NG06 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIM58Q8NG06 C11orf96-202ENST00000528572 1834 ntBASIC23.72■■□□□ 1.39
TRIM58Q8NG06 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.72■■□□□ 1.39
TRIM58Q8NG06 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.72■■□□□ 1.39
TRIM58Q8NG06 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM58Q8NG06 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
TRIM58Q8NG06 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.71■■□□□ 1.39
TRIM58Q8NG06 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM58Q8NG06 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.71■■□□□ 1.39
TRIM58Q8NG06 AC019171.1-201ENST00000601251 1056 ntBASIC23.71■■□□□ 1.39
TRIM58Q8NG06 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIM58Q8NG06 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.71■■□□□ 1.39
TRIM58Q8NG06 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.7■■□□□ 1.39
TRIM58Q8NG06 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.7■■□□□ 1.38
TRIM58Q8NG06 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
TRIM58Q8NG06 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIM58Q8NG06 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms