Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC190Q86UF4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.55■□□□□ 0.72
CCDC190Q86UF4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC190Q86UF4 AC087741.3-201ENST00000624270 1347 ntBASIC19.54■□□□□ 0.72
CCDC190Q86UF4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC190Q86UF4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC190Q86UF4 PKD1P6-201ENST00000343738 4769 ntBASIC19.54■□□□□ 0.72
CCDC190Q86UF4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC190Q86UF4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC190Q86UF4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.54■□□□□ 0.72
CCDC190Q86UF4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC190Q86UF4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC190Q86UF4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC190Q86UF4 RNF165-205ENST00000588679 2904 ntBASIC19.54■□□□□ 0.72
CCDC190Q86UF4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC190Q86UF4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC190Q86UF4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC190Q86UF4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC190Q86UF4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC190Q86UF4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC190Q86UF4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC190Q86UF4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC190Q86UF4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC190Q86UF4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC190Q86UF4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC190Q86UF4 AC126177.7-201ENST00000547904 679 ntBASIC19.53■□□□□ 0.72
CCDC190Q86UF4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC190Q86UF4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC190Q86UF4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC190Q86UF4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC190Q86UF4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC190Q86UF4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC190Q86UF4 AC010542.4-201ENST00000563151 1910 ntBASIC19.53■□□□□ 0.72
CCDC190Q86UF4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC190Q86UF4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC190Q86UF4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC190Q86UF4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC190Q86UF4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC190Q86UF4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CCDC190Q86UF4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC190Q86UF4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC190Q86UF4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC190Q86UF4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC190Q86UF4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC190Q86UF4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.52■□□□□ 0.71
CCDC190Q86UF4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC190Q86UF4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC190Q86UF4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC190Q86UF4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC190Q86UF4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC190Q86UF4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CCDC190Q86UF4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC190Q86UF4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC190Q86UF4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC190Q86UF4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC190Q86UF4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC190Q86UF4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC190Q86UF4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC190Q86UF4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC190Q86UF4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CCDC190Q86UF4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC190Q86UF4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC190Q86UF4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC190Q86UF4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC190Q86UF4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC190Q86UF4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC190Q86UF4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC190Q86UF4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC190Q86UF4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC190Q86UF4 DUX4L13-201ENST00000554103 1267 ntBASIC19.49■□□□□ 0.71
CCDC190Q86UF4 DUX4L15-201ENST00000611059 1267 ntBASIC19.49■□□□□ 0.71
CCDC190Q86UF4 DUX4L23-201ENST00000615195 1269 ntBASIC19.49■□□□□ 0.71
CCDC190Q86UF4 DUX4L24-201ENST00000617576 1269 ntBASIC19.49■□□□□ 0.71
CCDC190Q86UF4 DUX4L22-201ENST00000618238 1269 ntBASIC19.49■□□□□ 0.71
CCDC190Q86UF4 DUX4L20-201ENST00000619712 1269 ntBASIC19.49■□□□□ 0.71
CCDC190Q86UF4 DUX4L21-201ENST00000622058 1269 ntBASIC19.49■□□□□ 0.71
CCDC190Q86UF4 DUX4L10-201ENST00000622460 1267 ntBASIC19.49■□□□□ 0.71
CCDC190Q86UF4 DUX4L25-201ENST00000624915 1269 ntBASIC19.49■□□□□ 0.71
CCDC190Q86UF4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC190Q86UF4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC190Q86UF4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC190Q86UF4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC190Q86UF4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC190Q86UF4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC190Q86UF4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC190Q86UF4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC190Q86UF4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC190Q86UF4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC190Q86UF4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC190Q86UF4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC190Q86UF4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC190Q86UF4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC190Q86UF4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC190Q86UF4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC190Q86UF4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC190Q86UF4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC190Q86UF4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC190Q86UF4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC190Q86UF4 DUX4L29-201ENST00000425409 679 ntBASIC19.47■□□□□ 0.71
CCDC190Q86UF4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms