Protein–RNA interactions for Protein: Q7RTT6

SSX6, Putative protein SSX6, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX6Q7RTT6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSX6Q7RTT6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSX6Q7RTT6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
SSX6Q7RTT6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSX6Q7RTT6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.95■□□□□ 0.78
SSX6Q7RTT6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSX6Q7RTT6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.95■□□□□ 0.78
SSX6Q7RTT6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.94■□□□□ 0.78
SSX6Q7RTT6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSX6Q7RTT6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SSX6Q7RTT6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SSX6Q7RTT6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.94■□□□□ 0.78
SSX6Q7RTT6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SSX6Q7RTT6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.94■□□□□ 0.78
SSX6Q7RTT6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSX6Q7RTT6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSX6Q7RTT6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSX6Q7RTT6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SSX6Q7RTT6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSX6Q7RTT6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SSX6Q7RTT6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
SSX6Q7RTT6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SSX6Q7RTT6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.93■□□□□ 0.78
SSX6Q7RTT6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
SSX6Q7RTT6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SSX6Q7RTT6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSX6Q7RTT6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSX6Q7RTT6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSX6Q7RTT6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SSX6Q7RTT6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSX6Q7RTT6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSX6Q7RTT6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSX6Q7RTT6 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.92■□□□□ 0.78
SSX6Q7RTT6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.92■□□□□ 0.78
SSX6Q7RTT6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.92■□□□□ 0.78
SSX6Q7RTT6 HSD17B1P1-201ENST00000590052 955 ntBASIC19.92■□□□□ 0.78
SSX6Q7RTT6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SSX6Q7RTT6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.92■□□□□ 0.78
SSX6Q7RTT6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSX6Q7RTT6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSX6Q7RTT6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SSX6Q7RTT6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.91■□□□□ 0.78
SSX6Q7RTT6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSX6Q7RTT6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSX6Q7RTT6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.91■□□□□ 0.78
SSX6Q7RTT6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SSX6Q7RTT6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.91■□□□□ 0.78
SSX6Q7RTT6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.91■□□□□ 0.78
SSX6Q7RTT6 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.91■□□□□ 0.78
SSX6Q7RTT6 DUX4L18-201ENST00000553347 1267 ntBASIC19.91■□□□□ 0.78
SSX6Q7RTT6 AC019171.1-201ENST00000601251 1056 ntBASIC19.91■□□□□ 0.78
SSX6Q7RTT6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SSX6Q7RTT6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SSX6Q7RTT6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SSX6Q7RTT6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SSX6Q7RTT6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX6Q7RTT6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.9■□□□□ 0.78
SSX6Q7RTT6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SSX6Q7RTT6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SSX6Q7RTT6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SSX6Q7RTT6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.9■□□□□ 0.78
SSX6Q7RTT6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.9■□□□□ 0.78
SSX6Q7RTT6 AF131216.4-201ENST00000638924 1588 ntBASIC19.9■□□□□ 0.78
SSX6Q7RTT6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.9■□□□□ 0.78
SSX6Q7RTT6 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.9■□□□□ 0.78
SSX6Q7RTT6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SSX6Q7RTT6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SSX6Q7RTT6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSX6Q7RTT6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SSX6Q7RTT6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSX6Q7RTT6 AC022616.5-201ENST00000518796 181 ntBASIC19.89■□□□□ 0.77
SSX6Q7RTT6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SSX6Q7RTT6 AC120024.1-201ENST00000562672 995 ntBASIC19.89■□□□□ 0.77
SSX6Q7RTT6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.89■□□□□ 0.77
SSX6Q7RTT6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SSX6Q7RTT6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSX6Q7RTT6 AC127496.7-201ENST00000625110 1798 ntBASIC19.89■□□□□ 0.77
SSX6Q7RTT6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SSX6Q7RTT6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSX6Q7RTT6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.88■□□□□ 0.77
SSX6Q7RTT6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
SSX6Q7RTT6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.88■□□□□ 0.77
SSX6Q7RTT6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSX6Q7RTT6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSX6Q7RTT6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSX6Q7RTT6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSX6Q7RTT6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSX6Q7RTT6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.88■□□□□ 0.77
SSX6Q7RTT6 AC139795.1-202ENST00000500444 432 ntBASIC19.88■□□□□ 0.77
SSX6Q7RTT6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSX6Q7RTT6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
SSX6Q7RTT6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SSX6Q7RTT6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.88■□□□□ 0.77
SSX6Q7RTT6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SSX6Q7RTT6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX6Q7RTT6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSX6Q7RTT6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SSX6Q7RTT6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SSX6Q7RTT6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.87■□□□□ 0.77
SSX6Q7RTT6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms