Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTC1Q2NKJ3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTC1Q2NKJ3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CTC1Q2NKJ3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
CTC1Q2NKJ3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTC1Q2NKJ3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.02■■□□□ 1.44
CTC1Q2NKJ3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.02■■□□□ 1.44
CTC1Q2NKJ3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.02■■□□□ 1.44
CTC1Q2NKJ3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.02■■□□□ 1.44
CTC1Q2NKJ3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
CTC1Q2NKJ3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTC1Q2NKJ3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTC1Q2NKJ3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.02■■□□□ 1.44
CTC1Q2NKJ3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTC1Q2NKJ3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.02■■□□□ 1.44
CTC1Q2NKJ3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.01■■□□□ 1.43
CTC1Q2NKJ3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CTC1Q2NKJ3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.01■■□□□ 1.43
CTC1Q2NKJ3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CTC1Q2NKJ3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CTC1Q2NKJ3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.01■■□□□ 1.43
CTC1Q2NKJ3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24■■□□□ 1.43
CTC1Q2NKJ3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24■■□□□ 1.43
CTC1Q2NKJ3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24■■□□□ 1.43
CTC1Q2NKJ3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CTC1Q2NKJ3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CTC1Q2NKJ3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CTC1Q2NKJ3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CTC1Q2NKJ3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CTC1Q2NKJ3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CTC1Q2NKJ3 CCDC92B-201ENST00000575506 885 ntBASIC23.99■■□□□ 1.43
CTC1Q2NKJ3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.99■■□□□ 1.43
CTC1Q2NKJ3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CTC1Q2NKJ3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTC1Q2NKJ3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CTC1Q2NKJ3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.99■■□□□ 1.43
CTC1Q2NKJ3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTC1Q2NKJ3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.99■■□□□ 1.43
CTC1Q2NKJ3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CTC1Q2NKJ3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CTC1Q2NKJ3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CTC1Q2NKJ3 MIR572-201ENST00000384983 95 ntBASIC23.98■■□□□ 1.43
CTC1Q2NKJ3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.98■■□□□ 1.43
CTC1Q2NKJ3 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.98■■□□□ 1.43
CTC1Q2NKJ3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.98■■□□□ 1.43
CTC1Q2NKJ3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CTC1Q2NKJ3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.98■■□□□ 1.43
CTC1Q2NKJ3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.98■■□□□ 1.43
CTC1Q2NKJ3 AC142381.3-201ENST00000568208 1670 ntBASIC23.98■■□□□ 1.43
CTC1Q2NKJ3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.98■■□□□ 1.43
CTC1Q2NKJ3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CTC1Q2NKJ3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CTC1Q2NKJ3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CTC1Q2NKJ3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CTC1Q2NKJ3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.97■■□□□ 1.43
CTC1Q2NKJ3 AL022069.1-201ENST00000568025 1636 ntBASIC23.97■■□□□ 1.43
CTC1Q2NKJ3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
CTC1Q2NKJ3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.97■■□□□ 1.43
CTC1Q2NKJ3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
CTC1Q2NKJ3 NTF6G-201ENST00000591094 616 ntBASIC23.97■■□□□ 1.43
CTC1Q2NKJ3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.97■■□□□ 1.43
CTC1Q2NKJ3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.96■■□□□ 1.43
CTC1Q2NKJ3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CTC1Q2NKJ3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
CTC1Q2NKJ3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.96■■□□□ 1.43
CTC1Q2NKJ3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.96■■□□□ 1.43
CTC1Q2NKJ3 HLA-L-209ENST00000420110 1011 ntBASIC23.96■■□□□ 1.43
CTC1Q2NKJ3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.96■■□□□ 1.43
CTC1Q2NKJ3 pRNA.6-201ENST00000610482 90 ntBASIC23.96■■□□□ 1.43
CTC1Q2NKJ3 pRNA.5-201ENST00000612139 90 ntBASIC23.96■■□□□ 1.43
CTC1Q2NKJ3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.96■■□□□ 1.43
CTC1Q2NKJ3 pRNA.11-201ENST00000618423 90 ntBASIC23.96■■□□□ 1.43
CTC1Q2NKJ3 pRNA.13-201ENST00000619112 90 ntBASIC23.96■■□□□ 1.43
CTC1Q2NKJ3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CTC1Q2NKJ3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
CTC1Q2NKJ3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CTC1Q2NKJ3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CTC1Q2NKJ3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.95■■□□□ 1.42
CTC1Q2NKJ3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.95■■□□□ 1.42
CTC1Q2NKJ3 IGHV3-19-201ENST00000521488 291 ntBASIC23.95■■□□□ 1.42
CTC1Q2NKJ3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.95■■□□□ 1.42
CTC1Q2NKJ3 AC012414.1-201ENST00000556676 535 ntBASIC23.95■■□□□ 1.42
CTC1Q2NKJ3 AL354811.1-201ENST00000610286 706 ntBASIC23.95■■□□□ 1.42
CTC1Q2NKJ3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.95■■□□□ 1.42
CTC1Q2NKJ3 MIR6084-201ENST00000622012 110 ntBASIC23.95■■□□□ 1.42
CTC1Q2NKJ3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CTC1Q2NKJ3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.95■■□□□ 1.42
CTC1Q2NKJ3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.95■■□□□ 1.42
CTC1Q2NKJ3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.94■■□□□ 1.42
CTC1Q2NKJ3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CTC1Q2NKJ3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CTC1Q2NKJ3 AC010501.1-201ENST00000606270 1962 ntBASIC23.94■■□□□ 1.42
CTC1Q2NKJ3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CTC1Q2NKJ3 AL139125.2-201ENST00000623134 1869 ntBASIC23.94■■□□□ 1.42
CTC1Q2NKJ3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.94■■□□□ 1.42
CTC1Q2NKJ3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.94■■□□□ 1.42
CTC1Q2NKJ3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.94■■□□□ 1.42
CTC1Q2NKJ3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
CTC1Q2NKJ3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CTC1Q2NKJ3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms