Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
GABREP78334 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GABREP78334 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
GABREP78334 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GABREP78334 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.4■■□□□ 1.02
GABREP78334 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.4■■□□□ 1.02
GABREP78334 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
GABREP78334 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GABREP78334 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.4■■□□□ 1.02
GABREP78334 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.4■■□□□ 1.02
GABREP78334 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.4■■□□□ 1.02
GABREP78334 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GABREP78334 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.4■■□□□ 1.02
GABREP78334 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GABREP78334 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.39■■□□□ 1.02
GABREP78334 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
GABREP78334 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
GABREP78334 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GABREP78334 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GABREP78334 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GABREP78334 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.39■■□□□ 1.01
GABREP78334 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.39■■□□□ 1.01
GABREP78334 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
GABREP78334 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GABREP78334 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
GABREP78334 LINC02228-203ENST00000641970 1355 ntBASIC21.38■■□□□ 1.01
GABREP78334 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.38■■□□□ 1.01
GABREP78334 AC133637.1-201ENST00000624115 1537 ntBASIC21.38■■□□□ 1.01
GABREP78334 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GABREP78334 ALDH1A3-203ENST00000557963 1670 ntBASIC21.37■■□□□ 1.01
GABREP78334 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.37■■□□□ 1.01
GABREP78334 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GABREP78334 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
GABREP78334 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
GABREP78334 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GABREP78334 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.37■■□□□ 1.01
GABREP78334 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GABREP78334 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
GABREP78334 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
GABREP78334 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.37■■□□□ 1.01
GABREP78334 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GABREP78334 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GABREP78334 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.36■■□□□ 1.01
GABREP78334 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.36■■□□□ 1.01
GABREP78334 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.36■■□□□ 1.01
GABREP78334 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.36■■□□□ 1.01
GABREP78334 TERF1P2-201ENST00000583350 1212 ntBASIC21.36■■□□□ 1.01
GABREP78334 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GABREP78334 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
GABREP78334 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GABREP78334 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GABREP78334 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.35■■□□□ 1.01
GABREP78334 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GABREP78334 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GABREP78334 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GABREP78334 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GABREP78334 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GABREP78334 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GABREP78334 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GABREP78334 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
GABREP78334 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GABREP78334 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GABREP78334 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GABREP78334 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
GABREP78334 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GABREP78334 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GABREP78334 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
GABREP78334 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
GABREP78334 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
GABREP78334 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
GABREP78334 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.34■■□□□ 1.01
GABREP78334 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.34■■□□□ 1.01
GABREP78334 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.34■■□□□ 1.01
GABREP78334 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.34■■□□□ 1.01
GABREP78334 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.34■■□□□ 1.01
GABREP78334 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GABREP78334 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.34■■□□□ 1.01
GABREP78334 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GABREP78334 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GABREP78334 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
GABREP78334 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
GABREP78334 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
GABREP78334 HLA-L-209ENST00000420110 1011 ntBASIC21.33■■□□□ 1.01
GABREP78334 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.33■■□□□ 1.01
GABREP78334 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
GABREP78334 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
GABREP78334 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
GABREP78334 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.33■■□□□ 1.01
GABREP78334 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.33■■□□□ 1
GABREP78334 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
GABREP78334 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GABREP78334 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
GABREP78334 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
GABREP78334 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GABREP78334 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.32■■□□□ 1
GABREP78334 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GABREP78334 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GABREP78334 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.32■■□□□ 1
GABREP78334 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
GABREP78334 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms