Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
WNT3P56703 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
WNT3P56703 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
WNT3P56703 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.24■□□□□ 0.99
WNT3P56703 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
WNT3P56703 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.24■□□□□ 0.99
WNT3P56703 AC131212.1-201ENST00000613771 668 ntBASIC21.24■□□□□ 0.99
WNT3P56703 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.24■□□□□ 0.99
WNT3P56703 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
WNT3P56703 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
WNT3P56703 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
WNT3P56703 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
WNT3P56703 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
WNT3P56703 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
WNT3P56703 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.23■□□□□ 0.99
WNT3P56703 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.23■□□□□ 0.99
WNT3P56703 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.23■□□□□ 0.99
WNT3P56703 AC137630.3-201ENST00000607245 391 ntBASIC21.23■□□□□ 0.99
WNT3P56703 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.23■□□□□ 0.99
WNT3P56703 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.23■□□□□ 0.99
WNT3P56703 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
WNT3P56703 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
WNT3P56703 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
WNT3P56703 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
WNT3P56703 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.23■□□□□ 0.99
WNT3P56703 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
WNT3P56703 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
WNT3P56703 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
WNT3P56703 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
WNT3P56703 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
WNT3P56703 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
WNT3P56703 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
WNT3P56703 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
WNT3P56703 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.22■□□□□ 0.99
WNT3P56703 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.22■□□□□ 0.99
WNT3P56703 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
WNT3P56703 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
WNT3P56703 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
WNT3P56703 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
WNT3P56703 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
WNT3P56703 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
WNT3P56703 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
WNT3P56703 AL353803.4-201ENST00000565882 1934 ntBASIC21.21■□□□□ 0.99
WNT3P56703 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
WNT3P56703 GUSBP5-202ENST00000510805 1989 ntBASIC21.21■□□□□ 0.99
WNT3P56703 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.21■□□□□ 0.99
WNT3P56703 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
WNT3P56703 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.21■□□□□ 0.99
WNT3P56703 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
WNT3P56703 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
WNT3P56703 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
WNT3P56703 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
WNT3P56703 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
WNT3P56703 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
WNT3P56703 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
WNT3P56703 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.2■□□□□ 0.98
WNT3P56703 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
WNT3P56703 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.2■□□□□ 0.98
WNT3P56703 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.2■□□□□ 0.98
WNT3P56703 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
WNT3P56703 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
WNT3P56703 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
WNT3P56703 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
WNT3P56703 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.19■□□□□ 0.98
WNT3P56703 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
WNT3P56703 AL356441.2-201ENST00000443009 864 ntBASIC21.19■□□□□ 0.98
WNT3P56703 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
WNT3P56703 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.19■□□□□ 0.98
WNT3P56703 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
WNT3P56703 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
WNT3P56703 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.19■□□□□ 0.98
WNT3P56703 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
WNT3P56703 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
WNT3P56703 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
WNT3P56703 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.18■□□□□ 0.98
WNT3P56703 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
WNT3P56703 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
WNT3P56703 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.18■□□□□ 0.98
WNT3P56703 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.18■□□□□ 0.98
WNT3P56703 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
WNT3P56703 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
WNT3P56703 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
WNT3P56703 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
WNT3P56703 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
WNT3P56703 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
WNT3P56703 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.18■□□□□ 0.98
WNT3P56703 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
WNT3P56703 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.17■□□□□ 0.98
WNT3P56703 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
WNT3P56703 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.17■□□□□ 0.98
WNT3P56703 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
WNT3P56703 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.17■□□□□ 0.98
WNT3P56703 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
WNT3P56703 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
WNT3P56703 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
WNT3P56703 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.17■□□□□ 0.98
WNT3P56703 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.17■□□□□ 0.98
WNT3P56703 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.17■□□□□ 0.98
WNT3P56703 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
WNT3P56703 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms