Protein–RNA interactions for Protein: P34223

SHP1, UBX domain-containing protein 1, yeastyeast

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHP1P34223 SNF8YPL002C 702 nt4.75□□□□□ -1.65
SHP1P34223 KRE6YPR159W 2163 nt4.75□□□□□ -1.65
SHP1P34223 GAS3YMR215W 1575 nt4.74□□□□□ -1.65
SHP1P34223 TPS3YMR261C 3165 nt4.74□□□□□ -1.65
SHP1P34223 IFM1YOL023W 2031 nt4.74□□□□□ -1.65
SHP1P34223 RMD1YDL001W 1293 nt4.74□□□□□ -1.65
SHP1P34223 YDR249CYDR249C 1122 nt4.74□□□□□ -1.65
SHP1P34223 YGL101WYGL101W 648 nt4.74□□□□□ -1.65
SHP1P34223 MIC26YGR235C 702 nt4.74□□□□□ -1.65
SHP1P34223 BMT5YIL096C 1011 nt4.74□□□□□ -1.65
SHP1P34223 YML031C-AYML031C-A 336 nt4.74□□□□□ -1.65
SHP1P34223 MNN4YKL201C 3537 nt4.74□□□□□ -1.65
SHP1P34223 MNT2YGL257C 1677 nt4.73□□□□□ -1.65
SHP1P34223 HXT7YDR342C 1713 nt4.73□□□□□ -1.65
SHP1P34223 HXT6YDR343C 1713 nt4.73□□□□□ -1.65
SHP1P34223 VID22YLR373C 2706 nt4.73□□□□□ -1.65
SHP1P34223 UBP9YER098W 2265 nt4.73□□□□□ -1.65
SHP1P34223 LUC7YDL087C 786 nt4.73□□□□□ -1.65
SHP1P34223 ARC1YGL105W 1131 nt4.73□□□□□ -1.65
SHP1P34223 CAX4YGR036C 720 nt4.73□□□□□ -1.65
SHP1P34223 ARD1YHR013C 717 nt4.73□□□□□ -1.65
SHP1P34223 YIL047C-AYIL047C-A 369 nt4.73□□□□□ -1.65
SHP1P34223 ECM1YAL059W 639 nt4.73□□□□□ -1.65
SHP1P34223 SUI3YPL237W 858 nt4.73□□□□□ -1.65
SHP1P34223 ANT1YPR128C 987 nt4.73□□□□□ -1.65
SHP1P34223 IMD2YHR216W 1572 nt4.73□□□□□ -1.65
SHP1P34223 PMA1YGL008C 2757 nt4.72□□□□□ -1.65
SHP1P34223 SUR2YDR297W 1050 nt4.72□□□□□ -1.65
SHP1P34223 HNT2YDR305C 654 nt4.72□□□□□ -1.65
SHP1P34223 URA3YEL021W 804 nt4.72□□□□□ -1.65
SHP1P34223 YOL024WYOL024W 519 nt4.72□□□□□ -1.65
SHP1P34223 LYS2YBR115C 4179 nt4.72□□□□□ -1.65
SHP1P34223 FLC1YPL221W 2382 nt4.71□□□□□ -1.65
SHP1P34223 DAL81YIR023W 2913 nt4.71□□□□□ -1.66
SHP1P34223 RPC53YDL150W 1269 nt4.71□□□□□ -1.66
SHP1P34223 RMD5YDR255C 1266 nt4.71□□□□□ -1.66
SHP1P34223 BUD16YEL029C 939 nt4.71□□□□□ -1.66
SHP1P34223 CAF16YFL028C 870 nt4.71□□□□□ -1.66
SHP1P34223 DUO1YGL061C 744 nt4.71□□□□□ -1.66
SHP1P34223 RPS0BYLR048W 759 nt4.71□□□□□ -1.66
SHP1P34223 YPR015CYPR015C 744 nt4.71□□□□□ -1.66
SHP1P34223 YBR126W-AYBR126W-A 207 nt4.71□□□□□ -1.66
SHP1P34223 BUD8YLR353W 1812 nt4.71□□□□□ -1.66
SHP1P34223 DBF2YGR092W 1719 nt4.71□□□□□ -1.66
SHP1P34223 STE20YHL007C 2820 nt4.71□□□□□ -1.66
SHP1P34223 TOS3YGL179C 1683 nt4.7□□□□□ -1.66
SHP1P34223 EUG1YDR518W 1554 nt4.7□□□□□ -1.66
SHP1P34223 PXA1YPL147W 2613 nt4.7□□□□□ -1.66
SHP1P34223 NTA1YJR062C 1374 nt4.7□□□□□ -1.66
SHP1P34223 YDR545C-AYDR545C-A 480 nt4.7□□□□□ -1.66
SHP1P34223 YEL077W-AYEL077W-A 483 nt4.7□□□□□ -1.66
SHP1P34223 YER190C-BYER190C-B 483 nt4.7□□□□□ -1.66
SHP1P34223 YFL068WYFL068W 483 nt4.7□□□□□ -1.66
SHP1P34223 YGR296C-BYGR296C-B 483 nt4.7□□□□□ -1.66
SHP1P34223 YHL050W-AYHL050W-A 483 nt4.7□□□□□ -1.66
SHP1P34223 SPO16YHR153C 597 nt4.7□□□□□ -1.66
SHP1P34223 YHR219C-AYHR219C-A 483 nt4.7□□□□□ -1.66
SHP1P34223 YIL177W-AYIL177W-A 483 nt4.7□□□□□ -1.66
SHP1P34223 YJL225W-AYJL225W-A 483 nt4.7□□□□□ -1.66
SHP1P34223 YLL066W-AYLL066W-A 483 nt4.7□□□□□ -1.66
SHP1P34223 YLL067W-AYLL067W-A 483 nt4.7□□□□□ -1.66
SHP1P34223 PRM9YAR031W 897 nt4.7□□□□□ -1.66
SHP1P34223 YLR466C-AYLR466C-A 483 nt4.7□□□□□ -1.66
SHP1P34223 YLR467C-AYLR467C-A 483 nt4.7□□□□□ -1.66
SHP1P34223 YML133W-BYML133W-B 483 nt4.7□□□□□ -1.66
SHP1P34223 YNL339W-BYNL339W-B 483 nt4.7□□□□□ -1.66
SHP1P34223 YBL113W-AYBL113W-A 483 nt4.7□□□□□ -1.66
SHP1P34223 YOR396C-AYOR396C-A 483 nt4.7□□□□□ -1.66
SHP1P34223 YPL283W-BYPL283W-B 483 nt4.7□□□□□ -1.66
SHP1P34223 YPR204C-AYPR204C-A 483 nt4.7□□□□□ -1.66
SHP1P34223 ARN2YHL047C 1863 nt4.7□□□□□ -1.66
SHP1P34223 TIP20YGL145W 2106 nt4.7□□□□□ -1.66
SHP1P34223 MEC3YLR288C 1425 nt4.7□□□□□ -1.66
SHP1P34223 CDC4YFL009W 2340 nt4.69□□□□□ -1.66
SHP1P34223 AXL2YIL140W 2472 nt4.69□□□□□ -1.66
SHP1P34223 YTA6YPL074W 2265 nt4.69□□□□□ -1.66
SHP1P34223 PAN1YIR006C 4443 nt4.69□□□□□ -1.66
SHP1P34223 ARO9YHR137W 1542 nt4.69□□□□□ -1.66
SHP1P34223 YDL241WYDL241W 372 nt4.69□□□□□ -1.66
SHP1P34223 UBC1YDR177W 648 nt4.69□□□□□ -1.66
SHP1P34223 YDR246W-AYDR246W-A 201 nt4.69□□□□□ -1.66
SHP1P34223 LOH1YJL038C 660 nt4.69□□□□□ -1.66
SHP1P34223 DAN1YJR150C 897 nt4.69□□□□□ -1.66
SHP1P34223 MRT4YKL009W 711 nt4.69□□□□□ -1.66
SHP1P34223 YMR306C-AYMR306C-A 390 nt4.69□□□□□ -1.66
SHP1P34223 VPS68YOL129W 555 nt4.69□□□□□ -1.66
SHP1P34223 PHO90YJL198W 2646 nt4.69□□□□□ -1.66
SHP1P34223 TUL1YKL034W 2277 nt4.69□□□□□ -1.66
SHP1P34223 EXO70YJL085W 1872 nt4.69□□□□□ -1.66
SHP1P34223 EKI1YDR147W 1605 nt4.68□□□□□ -1.66
SHP1P34223 ADE6YGR061C 4077 nt4.68□□□□□ -1.66
SHP1P34223 MPC1YGL080W 393 nt4.68□□□□□ -1.66
SHP1P34223 TIM21YGR033C 720 nt4.68□□□□□ -1.66
SHP1P34223 CDC12YHR107C 1224 nt4.68□□□□□ -1.66
SHP1P34223 HPM1YIL110W 1134 nt4.68□□□□□ -1.66
SHP1P34223 YIM2YMR151W 438 nt4.68□□□□□ -1.66
SHP1P34223 GAS2YLR343W 1668 nt4.67□□□□□ -1.66
SHP1P34223 KRE29YER038C 1395 nt4.67□□□□□ -1.66
SHP1P34223 MSK1YNL073W 1731 nt4.67□□□□□ -1.66
SHP1P34223 THI22YPR121W 1719 nt4.67□□□□□ -1.66
Retrieved 100 of 7,029 protein–RNA pairs in 29.7 ms