Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 pRNA.13-201ENST00000619112 90 ntBASIC23.11■■□□□ 1.29
SLC6A4P31645 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.11■■□□□ 1.29
SLC6A4P31645 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC6A4P31645 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SLC6A4P31645 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
SLC6A4P31645 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.1■■□□□ 1.29
SLC6A4P31645 AC011298.3-201ENST00000615796 283 ntBASIC23.1■■□□□ 1.29
SLC6A4P31645 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
SLC6A4P31645 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
SLC6A4P31645 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC6A4P31645 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC6A4P31645 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC6A4P31645 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC6A4P31645 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC6A4P31645 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.09■■□□□ 1.29
SLC6A4P31645 SUDS3P1-201ENST00000505831 966 ntBASIC23.09■■□□□ 1.29
SLC6A4P31645 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.09■■□□□ 1.29
SLC6A4P31645 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.09■■□□□ 1.29
SLC6A4P31645 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.09■■□□□ 1.29
SLC6A4P31645 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.09■■□□□ 1.29
SLC6A4P31645 FP325331.1-202ENST00000623531 1380 ntBASIC23.09■■□□□ 1.29
SLC6A4P31645 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
SLC6A4P31645 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.08■■□□□ 1.29
SLC6A4P31645 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SLC6A4P31645 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SLC6A4P31645 EDA-201ENST00000338901 1233 ntBASIC23.08■■□□□ 1.29
SLC6A4P31645 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.08■■□□□ 1.29
SLC6A4P31645 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SLC6A4P31645 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SLC6A4P31645 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.08■■□□□ 1.29
SLC6A4P31645 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC6A4P31645 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
SLC6A4P31645 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SLC6A4P31645 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SLC6A4P31645 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.08■■□□□ 1.29
SLC6A4P31645 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
SLC6A4P31645 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SLC6A4P31645 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC6A4P31645 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SLC6A4P31645 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.07■■□□□ 1.28
SLC6A4P31645 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SLC6A4P31645 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC6A4P31645 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SLC6A4P31645 DUX4L4-201ENST00000566884 1269 ntBASIC23.07■■□□□ 1.28
SLC6A4P31645 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.07■■□□□ 1.28
SLC6A4P31645 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
SLC6A4P31645 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC6A4P31645 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
SLC6A4P31645 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC6A4P31645 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SLC6A4P31645 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLC6A4P31645 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.06■■□□□ 1.28
SLC6A4P31645 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.06■■□□□ 1.28
SLC6A4P31645 AL355001.2-201ENST00000620617 1191 ntBASIC23.06■■□□□ 1.28
SLC6A4P31645 AC136469.2-201ENST00000623944 1028 ntBASIC23.06■■□□□ 1.28
SLC6A4P31645 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.06■■□□□ 1.28
SLC6A4P31645 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.06■■□□□ 1.28
SLC6A4P31645 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLC6A4P31645 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
SLC6A4P31645 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.05■■□□□ 1.28
SLC6A4P31645 LINC01529-204ENST00000636474 1715 ntBASIC23.05■■□□□ 1.28
SLC6A4P31645 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SLC6A4P31645 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC6A4P31645 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
SLC6A4P31645 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SLC6A4P31645 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SLC6A4P31645 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC6A4P31645 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC6A4P31645 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.04■■□□□ 1.28
SLC6A4P31645 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC6A4P31645 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC6A4P31645 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SLC6A4P31645 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SLC6A4P31645 AP001330.3-201ENST00000520123 633 ntBASIC23.04■■□□□ 1.28
SLC6A4P31645 AF213884.3-201ENST00000563833 479 ntBASIC23.04■■□□□ 1.28
SLC6A4P31645 AC142381.2-201ENST00000566120 298 ntBASIC23.04■■□□□ 1.28
SLC6A4P31645 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC6A4P31645 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC6A4P31645 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.04■■□□□ 1.28
SLC6A4P31645 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SLC6A4P31645 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC6A4P31645 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC6A4P31645 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.03■■□□□ 1.28
SLC6A4P31645 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
SLC6A4P31645 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.03■■□□□ 1.28
SLC6A4P31645 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC6A4P31645 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.03■■□□□ 1.28
SLC6A4P31645 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.03■■□□□ 1.28
SLC6A4P31645 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SLC6A4P31645 AL499627.2-201ENST00000606283 725 ntBASIC23.03■■□□□ 1.28
SLC6A4P31645 AL136967.2-201ENST00000623968 743 ntBASIC23.03■■□□□ 1.28
SLC6A4P31645 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC6A4P31645 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
SLC6A4P31645 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.03■■□□□ 1.28
SLC6A4P31645 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SLC6A4P31645 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.02■■□□□ 1.28
SLC6A4P31645 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SLC6A4P31645 MIR939-201ENST00000401314 82 ntBASIC23.02■■□□□ 1.28
SLC6A4P31645 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.02■■□□□ 1.28
SLC6A4P31645 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms