Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PTPN6P29350 GUSBP5-202ENST00000510805 1989 ntBASIC21.28■■□□□ 1
PTPN6P29350 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN6P29350 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.28■■□□□ 1
PTPN6P29350 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.28■■□□□ 1
PTPN6P29350 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.28■■□□□ 1
PTPN6P29350 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTPN6P29350 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTPN6P29350 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTPN6P29350 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTPN6P29350 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.28■■□□□ 1
PTPN6P29350 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN6P29350 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.28■■□□□ 1
PTPN6P29350 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTPN6P29350 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.27■■□□□ 1
PTPN6P29350 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.27■■□□□ 1
PTPN6P29350 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.27■■□□□ 1
PTPN6P29350 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTPN6P29350 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTPN6P29350 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.27■■□□□ 1
PTPN6P29350 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTPN6P29350 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTPN6P29350 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.27■■□□□ 1
PTPN6P29350 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PTPN6P29350 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PTPN6P29350 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTPN6P29350 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PTPN6P29350 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTPN6P29350 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTPN6P29350 GUSBP5-201ENST00000418136 578 ntBASIC21.26■□□□□ 0.99
PTPN6P29350 AC004448.1-201ENST00000458332 883 ntBASIC21.26■□□□□ 0.99
PTPN6P29350 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.26■□□□□ 0.99
PTPN6P29350 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PTPN6P29350 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.26■□□□□ 0.99
PTPN6P29350 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTPN6P29350 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN6P29350 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN6P29350 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.25■□□□□ 0.99
PTPN6P29350 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.25■□□□□ 0.99
PTPN6P29350 KRT125P-201ENST00000546827 989 ntBASIC21.25■□□□□ 0.99
PTPN6P29350 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.25■□□□□ 0.99
PTPN6P29350 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.25■□□□□ 0.99
PTPN6P29350 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.25■□□□□ 0.99
PTPN6P29350 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN6P29350 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN6P29350 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPN6P29350 AC021242.3-201ENST00000607598 1377 ntBASIC21.24■□□□□ 0.99
PTPN6P29350 CLDN5-201ENST00000403084 2357 ntBASIC21.24■□□□□ 0.99
PTPN6P29350 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.24■□□□□ 0.99
PTPN6P29350 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN6P29350 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN6P29350 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PTPN6P29350 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.24■□□□□ 0.99
PTPN6P29350 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN6P29350 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN6P29350 LINC00526-201ENST00000581067 1875 ntBASIC21.24■□□□□ 0.99
PTPN6P29350 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PTPN6P29350 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.23■□□□□ 0.99
PTPN6P29350 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN6P29350 LINC00565-201ENST00000562710 2331 ntBASIC21.23■□□□□ 0.99
PTPN6P29350 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
PTPN6P29350 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN6P29350 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.23■□□□□ 0.99
PTPN6P29350 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.23■□□□□ 0.99
PTPN6P29350 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.23■□□□□ 0.99
PTPN6P29350 MIR4787-201ENST00000607364 84 ntBASIC21.23■□□□□ 0.99
PTPN6P29350 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
PTPN6P29350 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN6P29350 ECEL1P1-201ENST00000373592 1742 ntBASIC21.23■□□□□ 0.99
PTPN6P29350 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN6P29350 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPN6P29350 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PTPN6P29350 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN6P29350 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN6P29350 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
PTPN6P29350 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.22■□□□□ 0.99
PTPN6P29350 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTPN6P29350 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.22■□□□□ 0.99
PTPN6P29350 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN6P29350 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
PTPN6P29350 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PTPN6P29350 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN6P29350 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.2■□□□□ 0.99
PTPN6P29350 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.2■□□□□ 0.98
PTPN6P29350 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.2■□□□□ 0.98
PTPN6P29350 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN6P29350 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.2■□□□□ 0.98
PTPN6P29350 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.2■□□□□ 0.98
PTPN6P29350 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN6P29350 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.2■□□□□ 0.98
PTPN6P29350 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.2■□□□□ 0.98
PTPN6P29350 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN6P29350 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN6P29350 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN6P29350 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PTPN6P29350 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PTPN6P29350 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.19■□□□□ 0.98
PTPN6P29350 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PTPN6P29350 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.19■□□□□ 0.98
PTPN6P29350 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms