Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF253O75346 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ZNF253O75346 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ZNF253O75346 DUSP8P3-201ENST00000399571 1760 ntBASIC17.34■□□□□ 0.37
ZNF253O75346 SPCS2P3-201ENST00000500401 656 ntBASIC17.34■□□□□ 0.37
ZNF253O75346 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF253O75346 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF253O75346 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF253O75346 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF253O75346 AC011551.1-201ENST00000614101 683 ntBASIC17.34■□□□□ 0.37
ZNF253O75346 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF253O75346 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ZNF253O75346 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF253O75346 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF253O75346 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF253O75346 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF253O75346 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF253O75346 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF253O75346 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.33■□□□□ 0.37
ZNF253O75346 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF253O75346 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF253O75346 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ZNF253O75346 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.33■□□□□ 0.36
ZNF253O75346 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF253O75346 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF253O75346 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF253O75346 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF253O75346 AC127496.7-201ENST00000625110 1798 ntBASIC17.33■□□□□ 0.36
ZNF253O75346 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF253O75346 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF253O75346 AC007375.3-201ENST00000600936 2314 ntBASIC17.32■□□□□ 0.36
ZNF253O75346 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF253O75346 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF253O75346 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF253O75346 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF253O75346 LONRF2P2-201ENST00000439212 571 ntBASIC17.32■□□□□ 0.36
ZNF253O75346 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF253O75346 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ZNF253O75346 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF253O75346 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.32■□□□□ 0.36
ZNF253O75346 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF253O75346 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF253O75346 LINC00526-201ENST00000581067 1875 ntBASIC17.31■□□□□ 0.36
ZNF253O75346 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF253O75346 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF253O75346 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF253O75346 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF253O75346 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ZNF253O75346 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF253O75346 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNF253O75346 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF253O75346 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.31■□□□□ 0.36
ZNF253O75346 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF253O75346 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF253O75346 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNF253O75346 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF253O75346 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.3■□□□□ 0.36
ZNF253O75346 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF253O75346 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF253O75346 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF253O75346 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF253O75346 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF253O75346 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
ZNF253O75346 DUX4L9-201ENST00000449051 1259 ntBASIC17.3■□□□□ 0.36
ZNF253O75346 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF253O75346 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF253O75346 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
ZNF253O75346 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF253O75346 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF253O75346 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF253O75346 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF253O75346 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF253O75346 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF253O75346 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF253O75346 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF253O75346 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF253O75346 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF253O75346 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF253O75346 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
ZNF253O75346 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF253O75346 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ZNF253O75346 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF253O75346 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF253O75346 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF253O75346 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF253O75346 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF253O75346 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF253O75346 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ZNF253O75346 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF253O75346 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF253O75346 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF253O75346 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF253O75346 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF253O75346 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF253O75346 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
ZNF253O75346 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF253O75346 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF253O75346 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ZNF253O75346 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNF253O75346 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms