Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC019069.1-201ENST00000610008 1333 ntBASIC20.81■□□□□ 0.92
HCN1O60741 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HCN1O60741 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
HCN1O60741 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
HCN1O60741 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
HCN1O60741 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HCN1O60741 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.81■□□□□ 0.92
HCN1O60741 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
HCN1O60741 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HCN1O60741 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HCN1O60741 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HCN1O60741 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HCN1O60741 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.8■□□□□ 0.92
HCN1O60741 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HCN1O60741 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HCN1O60741 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HCN1O60741 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.8■□□□□ 0.92
HCN1O60741 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HCN1O60741 MIR4466-201ENST00000606121 54 ntBASIC20.8■□□□□ 0.92
HCN1O60741 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HCN1O60741 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HCN1O60741 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HCN1O60741 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
HCN1O60741 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HCN1O60741 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HCN1O60741 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.79■□□□□ 0.92
HCN1O60741 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.79■□□□□ 0.92
HCN1O60741 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.79■□□□□ 0.92
HCN1O60741 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HCN1O60741 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HCN1O60741 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HCN1O60741 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HCN1O60741 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
HCN1O60741 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.79■□□□□ 0.92
HCN1O60741 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HCN1O60741 AC005703.6-201ENST00000623265 1329 ntBASIC20.78■□□□□ 0.92
HCN1O60741 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.78■□□□□ 0.92
HCN1O60741 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HCN1O60741 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.78■□□□□ 0.92
HCN1O60741 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HCN1O60741 AL139246.5-201ENST00000606645 996 ntBASIC20.78■□□□□ 0.92
HCN1O60741 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HCN1O60741 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCN1O60741 AC131274.2-201ENST00000580697 1507 ntBASIC20.78■□□□□ 0.92
HCN1O60741 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCN1O60741 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HCN1O60741 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HCN1O60741 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.77■□□□□ 0.92
HCN1O60741 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HCN1O60741 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HCN1O60741 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HCN1O60741 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.77■□□□□ 0.92
HCN1O60741 AL022069.1-201ENST00000568025 1636 ntBASIC20.77■□□□□ 0.92
HCN1O60741 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
HCN1O60741 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HCN1O60741 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.91
HCN1O60741 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
HCN1O60741 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCN1O60741 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCN1O60741 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCN1O60741 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HCN1O60741 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCN1O60741 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.76■□□□□ 0.91
HCN1O60741 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.76■□□□□ 0.91
HCN1O60741 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.76■□□□□ 0.91
HCN1O60741 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HCN1O60741 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.76■□□□□ 0.91
HCN1O60741 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCN1O60741 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.76■□□□□ 0.91
HCN1O60741 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
HCN1O60741 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HCN1O60741 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCN1O60741 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HCN1O60741 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCN1O60741 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
HCN1O60741 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.75■□□□□ 0.91
HCN1O60741 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.75■□□□□ 0.91
HCN1O60741 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.75■□□□□ 0.91
HCN1O60741 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HCN1O60741 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCN1O60741 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HCN1O60741 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCN1O60741 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCN1O60741 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
HCN1O60741 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.75■□□□□ 0.91
HCN1O60741 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
HCN1O60741 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.75■□□□□ 0.91
HCN1O60741 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HCN1O60741 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.75■□□□□ 0.91
HCN1O60741 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCN1O60741 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCN1O60741 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.75■□□□□ 0.91
HCN1O60741 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HCN1O60741 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCN1O60741 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
HCN1O60741 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCN1O60741 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HCN1O60741 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HCN1O60741 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.74■□□□□ 0.91
HCN1O60741 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms