Protein–RNA interactions for Protein: O43516

WIPF1, WAS/WASL-interacting protein family member 1, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WIPF1O43516 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
WIPF1O43516 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
WIPF1O43516 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.16■□□□□ 0.34
WIPF1O43516 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
WIPF1O43516 AL596275.1-201ENST00000423464 877 ntBASIC17.16■□□□□ 0.34
WIPF1O43516 AC012414.1-201ENST00000556676 535 ntBASIC17.16■□□□□ 0.34
WIPF1O43516 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.16■□□□□ 0.34
WIPF1O43516 AC126544.1-201ENST00000580842 1059 ntBASIC17.16■□□□□ 0.34
WIPF1O43516 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.16■□□□□ 0.34
WIPF1O43516 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
WIPF1O43516 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
WIPF1O43516 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
WIPF1O43516 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
WIPF1O43516 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
WIPF1O43516 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
WIPF1O43516 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
WIPF1O43516 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.15■□□□□ 0.34
WIPF1O43516 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.15■□□□□ 0.34
WIPF1O43516 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
WIPF1O43516 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
WIPF1O43516 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
WIPF1O43516 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
WIPF1O43516 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
WIPF1O43516 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
WIPF1O43516 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
WIPF1O43516 RPS2P52-201ENST00000469610 820 ntBASIC17.14■□□□□ 0.33
WIPF1O43516 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.14■□□□□ 0.33
WIPF1O43516 BID-214ENST00000617586 542 ntTSL 5 BASIC17.14■□□□□ 0.33
WIPF1O43516 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
WIPF1O43516 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
WIPF1O43516 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.14■□□□□ 0.33
WIPF1O43516 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
WIPF1O43516 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
WIPF1O43516 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
WIPF1O43516 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.13■□□□□ 0.33
WIPF1O43516 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.13■□□□□ 0.33
WIPF1O43516 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
WIPF1O43516 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
WIPF1O43516 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
WIPF1O43516 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
WIPF1O43516 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
WIPF1O43516 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
WIPF1O43516 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
WIPF1O43516 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.13■□□□□ 0.33
WIPF1O43516 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.13■□□□□ 0.33
WIPF1O43516 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
WIPF1O43516 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
WIPF1O43516 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
WIPF1O43516 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
WIPF1O43516 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
WIPF1O43516 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
WIPF1O43516 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
WIPF1O43516 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
WIPF1O43516 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
WIPF1O43516 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.12■□□□□ 0.33
WIPF1O43516 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
WIPF1O43516 ITM2C-210ENST00000620962 501 ntBASIC17.12■□□□□ 0.33
WIPF1O43516 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
WIPF1O43516 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
WIPF1O43516 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
WIPF1O43516 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
WIPF1O43516 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
WIPF1O43516 LINC02228-203ENST00000641970 1355 ntBASIC17.12■□□□□ 0.33
WIPF1O43516 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
WIPF1O43516 AC145676.1-201ENST00000514988 2004 ntBASIC17.11■□□□□ 0.33
WIPF1O43516 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
WIPF1O43516 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
WIPF1O43516 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.11■□□□□ 0.33
WIPF1O43516 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
WIPF1O43516 KRT18P29-201ENST00000397031 1267 ntBASIC17.11■□□□□ 0.33
WIPF1O43516 TPRG1LP1-201ENST00000598702 760 ntBASIC17.11■□□□□ 0.33
WIPF1O43516 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
WIPF1O43516 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.11■□□□□ 0.33
WIPF1O43516 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
WIPF1O43516 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
WIPF1O43516 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
WIPF1O43516 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.1■□□□□ 0.33
WIPF1O43516 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
WIPF1O43516 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
WIPF1O43516 PRORSD1P-201ENST00000295112 541 ntBASIC17.1■□□□□ 0.33
WIPF1O43516 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.1■□□□□ 0.33
WIPF1O43516 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.1■□□□□ 0.33
WIPF1O43516 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.1■□□□□ 0.33
WIPF1O43516 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.1■□□□□ 0.33
WIPF1O43516 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
WIPF1O43516 AP004607.4-201ENST00000530158 1459 ntBASIC17.1■□□□□ 0.33
WIPF1O43516 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
WIPF1O43516 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
WIPF1O43516 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
WIPF1O43516 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
WIPF1O43516 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.09■□□□□ 0.33
WIPF1O43516 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.09■□□□□ 0.33
WIPF1O43516 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.09■□□□□ 0.33
WIPF1O43516 KRT18P61-201ENST00000585825 1298 ntBASIC17.09■□□□□ 0.33
WIPF1O43516 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.09■□□□□ 0.33
WIPF1O43516 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.09■□□□□ 0.33
WIPF1O43516 AP006294.2-201ENST00000641667 209 ntBASIC17.09■□□□□ 0.33
WIPF1O43516 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
WIPF1O43516 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
WIPF1O43516 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms