Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CLRN2A0PK11 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.85■■□□□ 1.89
CLRN2A0PK11 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
CLRN2A0PK11 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
CLRN2A0PK11 AC004911.1-201ENST00000416316 871 ntBASIC26.84■■□□□ 1.89
CLRN2A0PK11 CCDC92B-201ENST00000575506 885 ntBASIC26.84■■□□□ 1.89
CLRN2A0PK11 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC26.84■■□□□ 1.89
CLRN2A0PK11 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CLRN2A0PK11 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC26.84■■□□□ 1.89
CLRN2A0PK11 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CLRN2A0PK11 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CLRN2A0PK11 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CLRN2A0PK11 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC26.83■■□□□ 1.89
CLRN2A0PK11 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
CLRN2A0PK11 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CLRN2A0PK11 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CLRN2A0PK11 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
CLRN2A0PK11 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CLRN2A0PK11 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.82■■□□□ 1.88
CLRN2A0PK11 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.82■■□□□ 1.88
CLRN2A0PK11 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26.82■■□□□ 1.88
CLRN2A0PK11 AC022211.4-201ENST00000625094 2161 ntBASIC26.82■■□□□ 1.88
CLRN2A0PK11 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.82■■□□□ 1.88
CLRN2A0PK11 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.82■■□□□ 1.88
CLRN2A0PK11 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CLRN2A0PK11 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
CLRN2A0PK11 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CLRN2A0PK11 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CLRN2A0PK11 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CLRN2A0PK11 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC26.81■■□□□ 1.88
CLRN2A0PK11 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.81■■□□□ 1.88
CLRN2A0PK11 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC26.81■■□□□ 1.88
CLRN2A0PK11 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC26.81■■□□□ 1.88
CLRN2A0PK11 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.81■■□□□ 1.88
CLRN2A0PK11 AL354811.1-201ENST00000610286 706 ntBASIC26.81■■□□□ 1.88
CLRN2A0PK11 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC26.81■■□□□ 1.88
CLRN2A0PK11 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CLRN2A0PK11 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
CLRN2A0PK11 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CLRN2A0PK11 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.8■■□□□ 1.88
CLRN2A0PK11 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC26.8■■□□□ 1.88
CLRN2A0PK11 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.8■■□□□ 1.88
CLRN2A0PK11 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.8■■□□□ 1.88
CLRN2A0PK11 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CLRN2A0PK11 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.8■■□□□ 1.88
CLRN2A0PK11 AL499627.2-201ENST00000606283 725 ntBASIC26.8■■□□□ 1.88
CLRN2A0PK11 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CLRN2A0PK11 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CLRN2A0PK11 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CLRN2A0PK11 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CLRN2A0PK11 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC26.79■■□□□ 1.88
CLRN2A0PK11 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.79■■□□□ 1.88
CLRN2A0PK11 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CLRN2A0PK11 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
CLRN2A0PK11 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.78■■□□□ 1.88
CLRN2A0PK11 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.78■■□□□ 1.88
CLRN2A0PK11 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CLRN2A0PK11 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CLRN2A0PK11 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.77■■□□□ 1.88
CLRN2A0PK11 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CLRN2A0PK11 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
CLRN2A0PK11 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CLRN2A0PK11 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CLRN2A0PK11 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
CLRN2A0PK11 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC26.77■■□□□ 1.88
CLRN2A0PK11 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
CLRN2A0PK11 GXYLT1P2-201ENST00000433312 1230 ntBASIC26.77■■□□□ 1.88
CLRN2A0PK11 DLX3-202ENST00000512495 834 ntTSL 2 BASIC26.77■■□□□ 1.88
CLRN2A0PK11 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CLRN2A0PK11 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
CLRN2A0PK11 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CLRN2A0PK11 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC26.76■■□□□ 1.87
CLRN2A0PK11 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
CLRN2A0PK11 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.76■■□□□ 1.87
CLRN2A0PK11 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
CLRN2A0PK11 KRT18P14-201ENST00000534205 1250 ntBASIC26.76■■□□□ 1.87
CLRN2A0PK11 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC26.76■■□□□ 1.87
CLRN2A0PK11 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC26.76■■□□□ 1.87
CLRN2A0PK11 NTF6G-201ENST00000591094 616 ntBASIC26.76■■□□□ 1.87
CLRN2A0PK11 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC26.76■■□□□ 1.87
CLRN2A0PK11 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.75■■□□□ 1.87
CLRN2A0PK11 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CLRN2A0PK11 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
CLRN2A0PK11 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CLRN2A0PK11 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CLRN2A0PK11 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CLRN2A0PK11 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CLRN2A0PK11 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CLRN2A0PK11 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CLRN2A0PK11 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CLRN2A0PK11 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
CLRN2A0PK11 OR2I1P-207ENST00000453522 948 ntBASIC26.74■■□□□ 1.87
CLRN2A0PK11 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CLRN2A0PK11 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.74■■□□□ 1.87
CLRN2A0PK11 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CLRN2A0PK11 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CLRN2A0PK11 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.73■■□□□ 1.87
CLRN2A0PK11 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CLRN2A0PK11 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
CLRN2A0PK11 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 247.6 ms