Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRAV9-1A0A075B6T8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
TRAV9-1A0A075B6T8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-1A0A075B6T8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-1A0A075B6T8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-1A0A075B6T8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.86■□□□□ 0.29
TRAV9-1A0A075B6T8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRAV9-1A0A075B6T8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV9-1A0A075B6T8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV9-1A0A075B6T8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRAV9-1A0A075B6T8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV9-1A0A075B6T8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRAV9-1A0A075B6T8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRAV9-1A0A075B6T8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV9-1A0A075B6T8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV9-1A0A075B6T8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV9-1A0A075B6T8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV9-1A0A075B6T8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRAV9-1A0A075B6T8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV9-1A0A075B6T8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV9-1A0A075B6T8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV9-1A0A075B6T8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV9-1A0A075B6T8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRAV9-1A0A075B6T8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRAV9-1A0A075B6T8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV9-1A0A075B6T8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRAV9-1A0A075B6T8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV9-1A0A075B6T8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRAV9-1A0A075B6T8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV9-1A0A075B6T8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV9-1A0A075B6T8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV9-1A0A075B6T8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV9-1A0A075B6T8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV9-1A0A075B6T8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV9-1A0A075B6T8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRAV9-1A0A075B6T8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRAV9-1A0A075B6T8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV9-1A0A075B6T8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV9-1A0A075B6T8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV9-1A0A075B6T8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV9-1A0A075B6T8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV9-1A0A075B6T8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV9-1A0A075B6T8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TRAV9-1A0A075B6T8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV9-1A0A075B6T8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV9-1A0A075B6T8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV9-1A0A075B6T8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
TRAV9-1A0A075B6T8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV9-1A0A075B6T8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV9-1A0A075B6T8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV9-1A0A075B6T8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV9-1A0A075B6T8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV9-1A0A075B6T8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV9-1A0A075B6T8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAV9-1A0A075B6T8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV9-1A0A075B6T8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV9-1A0A075B6T8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRAV9-1A0A075B6T8 FAM99A-202ENST00000538190 1989 ntBASIC16.82■□□□□ 0.28
TRAV9-1A0A075B6T8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV9-1A0A075B6T8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV9-1A0A075B6T8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV9-1A0A075B6T8 HNRNPLP2-201ENST00000568980 1570 ntBASIC16.81■□□□□ 0.28
TRAV9-1A0A075B6T8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV9-1A0A075B6T8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV9-1A0A075B6T8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV9-1A0A075B6T8 AC136428.2-201ENST00000563187 214 ntBASIC16.81■□□□□ 0.28
TRAV9-1A0A075B6T8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV9-1A0A075B6T8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV9-1A0A075B6T8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV9-1A0A075B6T8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV9-1A0A075B6T8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV9-1A0A075B6T8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV9-1A0A075B6T8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV9-1A0A075B6T8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV9-1A0A075B6T8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRAV9-1A0A075B6T8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV9-1A0A075B6T8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRAV9-1A0A075B6T8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV9-1A0A075B6T8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV9-1A0A075B6T8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV9-1A0A075B6T8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV9-1A0A075B6T8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV9-1A0A075B6T8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV9-1A0A075B6T8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV9-1A0A075B6T8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRAV9-1A0A075B6T8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV9-1A0A075B6T8 AC079630.1-202ENST00000618127 1840 ntBASIC16.8■□□□□ 0.28
TRAV9-1A0A075B6T8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV9-1A0A075B6T8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV9-1A0A075B6T8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV9-1A0A075B6T8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV9-1A0A075B6T8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV9-1A0A075B6T8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV9-1A0A075B6T8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV9-1A0A075B6T8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV9-1A0A075B6T8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV9-1A0A075B6T8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAV9-1A0A075B6T8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV9-1A0A075B6T8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV9-1A0A075B6T8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms