Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
H2afb3S4R1G7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.18■■□□□ 1.3
H2afb3S4R1G7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.18■■□□□ 1.3
H2afb3S4R1G7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
H2afb3S4R1G7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
H2afb3S4R1G7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.17■■□□□ 1.3
H2afb3S4R1G7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
H2afb3S4R1G7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
H2afb3S4R1G7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
H2afb3S4R1G7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
H2afb3S4R1G7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.14■■□□□ 1.29
H2afb3S4R1G7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
H2afb3S4R1G7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
H2afb3S4R1G7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
H2afb3S4R1G7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.08■■□□□ 1.29
H2afb3S4R1G7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
H2afb3S4R1G7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
H2afb3S4R1G7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
H2afb3S4R1G7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
H2afb3S4R1G7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
H2afb3S4R1G7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
H2afb3S4R1G7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
H2afb3S4R1G7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
H2afb3S4R1G7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
H2afb3S4R1G7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
H2afb3S4R1G7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
H2afb3S4R1G7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
H2afb3S4R1G7 Gm27322-201ENSMUST00000184007 104 ntBASIC23■■□□□ 1.27
H2afb3S4R1G7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
H2afb3S4R1G7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.99■■□□□ 1.27
H2afb3S4R1G7 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.98■■□□□ 1.27
H2afb3S4R1G7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
H2afb3S4R1G7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
H2afb3S4R1G7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
H2afb3S4R1G7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
H2afb3S4R1G7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
H2afb3S4R1G7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22.96■■□□□ 1.27
H2afb3S4R1G7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.96■■□□□ 1.27
H2afb3S4R1G7 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.95■■□□□ 1.26
H2afb3S4R1G7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
H2afb3S4R1G7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.93■■□□□ 1.26
H2afb3S4R1G7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
H2afb3S4R1G7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
H2afb3S4R1G7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.92■■□□□ 1.26
H2afb3S4R1G7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
H2afb3S4R1G7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
H2afb3S4R1G7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
H2afb3S4R1G7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
H2afb3S4R1G7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
H2afb3S4R1G7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
H2afb3S4R1G7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
H2afb3S4R1G7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
H2afb3S4R1G7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
H2afb3S4R1G7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
H2afb3S4R1G7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
H2afb3S4R1G7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
H2afb3S4R1G7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
H2afb3S4R1G7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
H2afb3S4R1G7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
H2afb3S4R1G7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
H2afb3S4R1G7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
H2afb3S4R1G7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
H2afb3S4R1G7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
H2afb3S4R1G7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
H2afb3S4R1G7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
H2afb3S4R1G7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
H2afb3S4R1G7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
H2afb3S4R1G7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
H2afb3S4R1G7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
H2afb3S4R1G7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
H2afb3S4R1G7 Zxda-201ENSMUST00000117281 2621 ntBASIC22.73■■□□□ 1.23
H2afb3S4R1G7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
H2afb3S4R1G7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
H2afb3S4R1G7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
H2afb3S4R1G7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
H2afb3S4R1G7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
H2afb3S4R1G7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
H2afb3S4R1G7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
H2afb3S4R1G7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
H2afb3S4R1G7 Gm26115-201ENSMUST00000175605 87 ntBASIC22.65■■□□□ 1.22
H2afb3S4R1G7 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
H2afb3S4R1G7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
H2afb3S4R1G7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
H2afb3S4R1G7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
H2afb3S4R1G7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
H2afb3S4R1G7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
H2afb3S4R1G7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
H2afb3S4R1G7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.62■■□□□ 1.21
H2afb3S4R1G7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
H2afb3S4R1G7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
H2afb3S4R1G7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.61■■□□□ 1.21
H2afb3S4R1G7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
H2afb3S4R1G7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
H2afb3S4R1G7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
H2afb3S4R1G7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
H2afb3S4R1G7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
H2afb3S4R1G7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
H2afb3S4R1G7 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.58■■□□□ 1.21
H2afb3S4R1G7 Gm8109-201ENSMUST00000194076 746 ntBASIC22.57■■□□□ 1.2
H2afb3S4R1G7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms