Protein–RNA interactions for Protein: Q9R0P9

Uchl1, Ubiquitin carboxyl-terminal hydrolase isozyme L1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uchl1Q9R0P9 Zxda-201ENSMUST00000117281 2621 ntBASIC22.81■■□□□ 1.24
Uchl1Q9R0P9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Uchl1Q9R0P9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Uchl1Q9R0P9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Uchl1Q9R0P9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Uchl1Q9R0P9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Uchl1Q9R0P9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Uchl1Q9R0P9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Uchl1Q9R0P9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.74■■□□□ 1.23
Uchl1Q9R0P9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Uchl1Q9R0P9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.73■■□□□ 1.23
Uchl1Q9R0P9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Uchl1Q9R0P9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.72■■□□□ 1.23
Uchl1Q9R0P9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Uchl1Q9R0P9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Uchl1Q9R0P9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Uchl1Q9R0P9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Uchl1Q9R0P9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Uchl1Q9R0P9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.71■■□□□ 1.23
Uchl1Q9R0P9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Uchl1Q9R0P9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Uchl1Q9R0P9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Uchl1Q9R0P9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Uchl1Q9R0P9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Uchl1Q9R0P9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Uchl1Q9R0P9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
Uchl1Q9R0P9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Uchl1Q9R0P9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Uchl1Q9R0P9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Uchl1Q9R0P9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Uchl1Q9R0P9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Uchl1Q9R0P9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Uchl1Q9R0P9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Uchl1Q9R0P9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Uchl1Q9R0P9 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.64■■□□□ 1.22
Uchl1Q9R0P9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.64■■□□□ 1.21
Uchl1Q9R0P9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Uchl1Q9R0P9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Uchl1Q9R0P9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Uchl1Q9R0P9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Uchl1Q9R0P9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Uchl1Q9R0P9 Rab21-202ENSMUST00000218831 843 ntBASIC22.6■■□□□ 1.21
Uchl1Q9R0P9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Uchl1Q9R0P9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Uchl1Q9R0P9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.58■■□□□ 1.21
Uchl1Q9R0P9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Uchl1Q9R0P9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Uchl1Q9R0P9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
Uchl1Q9R0P9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Uchl1Q9R0P9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Uchl1Q9R0P9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Uchl1Q9R0P9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
Uchl1Q9R0P9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Uchl1Q9R0P9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Uchl1Q9R0P9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Uchl1Q9R0P9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Uchl1Q9R0P9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Uchl1Q9R0P9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.53■■□□□ 1.2
Uchl1Q9R0P9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Uchl1Q9R0P9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Uchl1Q9R0P9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Uchl1Q9R0P9 Mipep-204ENSMUST00000225043 1548 ntBASIC22.5■■□□□ 1.19
Uchl1Q9R0P9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.48■■□□□ 1.19
Uchl1Q9R0P9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.48■■□□□ 1.19
Uchl1Q9R0P9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Uchl1Q9R0P9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Uchl1Q9R0P9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Uchl1Q9R0P9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Uchl1Q9R0P9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Uchl1Q9R0P9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Uchl1Q9R0P9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Uchl1Q9R0P9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Uchl1Q9R0P9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Uchl1Q9R0P9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Uchl1Q9R0P9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Uchl1Q9R0P9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Uchl1Q9R0P9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Uchl1Q9R0P9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Uchl1Q9R0P9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.38■■□□□ 1.17
Uchl1Q9R0P9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Uchl1Q9R0P9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Uchl1Q9R0P9 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.37■■□□□ 1.17
Uchl1Q9R0P9 Amer2-203ENSMUST00000225247 2662 ntBASIC22.36■■□□□ 1.17
Uchl1Q9R0P9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Uchl1Q9R0P9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Uchl1Q9R0P9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Uchl1Q9R0P9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Uchl1Q9R0P9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Uchl1Q9R0P9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Uchl1Q9R0P9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
Uchl1Q9R0P9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Uchl1Q9R0P9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Uchl1Q9R0P9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
Uchl1Q9R0P9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Uchl1Q9R0P9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Uchl1Q9R0P9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.27■■□□□ 1.16
Uchl1Q9R0P9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
Uchl1Q9R0P9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Uchl1Q9R0P9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Uchl1Q9R0P9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms