Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Sec61a2Q9JLR1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.26■■□□□ 1.31
Sec61a2Q9JLR1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sec61a2Q9JLR1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sec61a2Q9JLR1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sec61a2Q9JLR1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.19■■□□□ 1.3
Sec61a2Q9JLR1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sec61a2Q9JLR1 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.14■■□□□ 1.29
Sec61a2Q9JLR1 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.14■■□□□ 1.29
Sec61a2Q9JLR1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Sec61a2Q9JLR1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.13■■□□□ 1.29
Sec61a2Q9JLR1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Sec61a2Q9JLR1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sec61a2Q9JLR1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Sec61a2Q9JLR1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sec61a2Q9JLR1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sec61a2Q9JLR1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sec61a2Q9JLR1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.06■■□□□ 1.28
Sec61a2Q9JLR1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sec61a2Q9JLR1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sec61a2Q9JLR1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sec61a2Q9JLR1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Sec61a2Q9JLR1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sec61a2Q9JLR1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Sec61a2Q9JLR1 Gm24804-201ENSMUST00000174982 85 ntBASIC22.98■■□□□ 1.27
Sec61a2Q9JLR1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sec61a2Q9JLR1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sec61a2Q9JLR1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sec61a2Q9JLR1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
Sec61a2Q9JLR1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Sec61a2Q9JLR1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sec61a2Q9JLR1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sec61a2Q9JLR1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sec61a2Q9JLR1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Sec61a2Q9JLR1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Sec61a2Q9JLR1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Sec61a2Q9JLR1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Sec61a2Q9JLR1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sec61a2Q9JLR1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.89■■□□□ 1.25
Sec61a2Q9JLR1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.89■■□□□ 1.25
Sec61a2Q9JLR1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Sec61a2Q9JLR1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Sec61a2Q9JLR1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sec61a2Q9JLR1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Sec61a2Q9JLR1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sec61a2Q9JLR1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.83■■□□□ 1.25
Sec61a2Q9JLR1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sec61a2Q9JLR1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sec61a2Q9JLR1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
Sec61a2Q9JLR1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
Sec61a2Q9JLR1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Sec61a2Q9JLR1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sec61a2Q9JLR1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.8■■□□□ 1.24
Sec61a2Q9JLR1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.79■■□□□ 1.24
Sec61a2Q9JLR1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sec61a2Q9JLR1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Sec61a2Q9JLR1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Sec61a2Q9JLR1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sec61a2Q9JLR1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sec61a2Q9JLR1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sec61a2Q9JLR1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sec61a2Q9JLR1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sec61a2Q9JLR1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sec61a2Q9JLR1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Sec61a2Q9JLR1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Sec61a2Q9JLR1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sec61a2Q9JLR1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.73■■□□□ 1.23
Sec61a2Q9JLR1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Sec61a2Q9JLR1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sec61a2Q9JLR1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sec61a2Q9JLR1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Sec61a2Q9JLR1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sec61a2Q9JLR1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sec61a2Q9JLR1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Sec61a2Q9JLR1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sec61a2Q9JLR1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sec61a2Q9JLR1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
Sec61a2Q9JLR1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Sec61a2Q9JLR1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sec61a2Q9JLR1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sec61a2Q9JLR1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Sec61a2Q9JLR1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Sec61a2Q9JLR1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.64■■□□□ 1.21
Sec61a2Q9JLR1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sec61a2Q9JLR1 Peli2-204ENSMUST00000226513 1320 ntBASIC22.62■■□□□ 1.21
Sec61a2Q9JLR1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.61■■□□□ 1.21
Sec61a2Q9JLR1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sec61a2Q9JLR1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sec61a2Q9JLR1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sec61a2Q9JLR1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
Sec61a2Q9JLR1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.58■■□□□ 1.2
Sec61a2Q9JLR1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sec61a2Q9JLR1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sec61a2Q9JLR1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Sec61a2Q9JLR1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sec61a2Q9JLR1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sec61a2Q9JLR1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sec61a2Q9JLR1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Sec61a2Q9JLR1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sec61a2Q9JLR1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms