Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hcfc2Q9D968 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcfc2Q9D968 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hcfc2Q9D968 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Hcfc2Q9D968 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hcfc2Q9D968 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hcfc2Q9D968 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hcfc2Q9D968 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hcfc2Q9D968 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hcfc2Q9D968 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hcfc2Q9D968 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hcfc2Q9D968 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hcfc2Q9D968 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Hcfc2Q9D968 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hcfc2Q9D968 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hcfc2Q9D968 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hcfc2Q9D968 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hcfc2Q9D968 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hcfc2Q9D968 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.44■□□□□ 0.7
Hcfc2Q9D968 Rab21-202ENSMUST00000218831 843 ntBASIC19.44■□□□□ 0.7
Hcfc2Q9D968 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hcfc2Q9D968 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.43■□□□□ 0.7
Hcfc2Q9D968 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hcfc2Q9D968 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.41■□□□□ 0.7
Hcfc2Q9D968 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hcfc2Q9D968 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hcfc2Q9D968 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.41■□□□□ 0.7
Hcfc2Q9D968 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hcfc2Q9D968 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hcfc2Q9D968 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hcfc2Q9D968 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hcfc2Q9D968 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hcfc2Q9D968 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
Hcfc2Q9D968 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hcfc2Q9D968 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Hcfc2Q9D968 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
Hcfc2Q9D968 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hcfc2Q9D968 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Hcfc2Q9D968 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Hcfc2Q9D968 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hcfc2Q9D968 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hcfc2Q9D968 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Hcfc2Q9D968 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hcfc2Q9D968 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hcfc2Q9D968 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hcfc2Q9D968 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hcfc2Q9D968 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hcfc2Q9D968 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hcfc2Q9D968 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.28■□□□□ 0.68
Hcfc2Q9D968 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hcfc2Q9D968 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hcfc2Q9D968 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hcfc2Q9D968 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hcfc2Q9D968 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hcfc2Q9D968 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hcfc2Q9D968 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hcfc2Q9D968 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.25■□□□□ 0.67
Hcfc2Q9D968 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hcfc2Q9D968 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hcfc2Q9D968 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hcfc2Q9D968 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hcfc2Q9D968 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Hcfc2Q9D968 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hcfc2Q9D968 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Hcfc2Q9D968 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hcfc2Q9D968 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hcfc2Q9D968 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Hcfc2Q9D968 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hcfc2Q9D968 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hcfc2Q9D968 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hcfc2Q9D968 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hcfc2Q9D968 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hcfc2Q9D968 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hcfc2Q9D968 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hcfc2Q9D968 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hcfc2Q9D968 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcfc2Q9D968 Amer2-203ENSMUST00000225247 2662 ntBASIC19.15■□□□□ 0.66
Hcfc2Q9D968 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hcfc2Q9D968 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hcfc2Q9D968 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Hcfc2Q9D968 Mipep-204ENSMUST00000225043 1548 ntBASIC19.13■□□□□ 0.65
Hcfc2Q9D968 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hcfc2Q9D968 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Hcfc2Q9D968 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Hcfc2Q9D968 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hcfc2Q9D968 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hcfc2Q9D968 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hcfc2Q9D968 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Hcfc2Q9D968 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.09■□□□□ 0.65
Hcfc2Q9D968 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hcfc2Q9D968 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hcfc2Q9D968 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hcfc2Q9D968 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.07■□□□□ 0.64
Hcfc2Q9D968 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Hcfc2Q9D968 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hcfc2Q9D968 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hcfc2Q9D968 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Hcfc2Q9D968 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.05■□□□□ 0.64
Hcfc2Q9D968 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Hcfc2Q9D968 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms