Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Chaf1bQ9D0N7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Chaf1bQ9D0N7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Chaf1bQ9D0N7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Chaf1bQ9D0N7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Chaf1bQ9D0N7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Chaf1bQ9D0N7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Chaf1bQ9D0N7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Chaf1bQ9D0N7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Chaf1bQ9D0N7 Zxda-201ENSMUST00000117281 2621 ntBASIC24.14■■□□□ 1.45
Chaf1bQ9D0N7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Chaf1bQ9D0N7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Chaf1bQ9D0N7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Chaf1bQ9D0N7 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Chaf1bQ9D0N7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Chaf1bQ9D0N7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Chaf1bQ9D0N7 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.11■■□□□ 1.45
Chaf1bQ9D0N7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Chaf1bQ9D0N7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Chaf1bQ9D0N7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.1■■□□□ 1.45
Chaf1bQ9D0N7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
Chaf1bQ9D0N7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Chaf1bQ9D0N7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Chaf1bQ9D0N7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Chaf1bQ9D0N7 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.06■■□□□ 1.44
Chaf1bQ9D0N7 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Chaf1bQ9D0N7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Chaf1bQ9D0N7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Chaf1bQ9D0N7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Chaf1bQ9D0N7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Chaf1bQ9D0N7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Chaf1bQ9D0N7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Chaf1bQ9D0N7 Mipep-204ENSMUST00000225043 1548 ntBASIC23.99■■□□□ 1.43
Chaf1bQ9D0N7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.98■■□□□ 1.43
Chaf1bQ9D0N7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Chaf1bQ9D0N7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Chaf1bQ9D0N7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Chaf1bQ9D0N7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Chaf1bQ9D0N7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.95■■□□□ 1.42
Chaf1bQ9D0N7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Chaf1bQ9D0N7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Chaf1bQ9D0N7 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.93■■□□□ 1.42
Chaf1bQ9D0N7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Chaf1bQ9D0N7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Chaf1bQ9D0N7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Chaf1bQ9D0N7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.9■■□□□ 1.42
Chaf1bQ9D0N7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Chaf1bQ9D0N7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Chaf1bQ9D0N7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Chaf1bQ9D0N7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Chaf1bQ9D0N7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Chaf1bQ9D0N7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Chaf1bQ9D0N7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Chaf1bQ9D0N7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Chaf1bQ9D0N7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Chaf1bQ9D0N7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Chaf1bQ9D0N7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Chaf1bQ9D0N7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.84■■□□□ 1.41
Chaf1bQ9D0N7 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.84■■□□□ 1.41
Chaf1bQ9D0N7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.84■■□□□ 1.41
Chaf1bQ9D0N7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Chaf1bQ9D0N7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
Chaf1bQ9D0N7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Chaf1bQ9D0N7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Chaf1bQ9D0N7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Chaf1bQ9D0N7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Chaf1bQ9D0N7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Chaf1bQ9D0N7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.39
Chaf1bQ9D0N7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Chaf1bQ9D0N7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Chaf1bQ9D0N7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Chaf1bQ9D0N7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Chaf1bQ9D0N7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Chaf1bQ9D0N7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Chaf1bQ9D0N7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Chaf1bQ9D0N7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Chaf1bQ9D0N7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Chaf1bQ9D0N7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Chaf1bQ9D0N7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Chaf1bQ9D0N7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Chaf1bQ9D0N7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chaf1bQ9D0N7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chaf1bQ9D0N7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Chaf1bQ9D0N7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chaf1bQ9D0N7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chaf1bQ9D0N7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Chaf1bQ9D0N7 Amer2-203ENSMUST00000225247 2662 ntBASIC23.69■■□□□ 1.38
Chaf1bQ9D0N7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Chaf1bQ9D0N7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Chaf1bQ9D0N7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Chaf1bQ9D0N7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Chaf1bQ9D0N7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
Chaf1bQ9D0N7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Chaf1bQ9D0N7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Chaf1bQ9D0N7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Chaf1bQ9D0N7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Chaf1bQ9D0N7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Chaf1bQ9D0N7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
Chaf1bQ9D0N7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Chaf1bQ9D0N7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms