Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22,92■■□□□ 1,26
Raet1eQ9CZQ6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22,92■■□□□ 1,26
Raet1eQ9CZQ6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22,91■■□□□ 1,26
Raet1eQ9CZQ6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22,91■■□□□ 1,26
Raet1eQ9CZQ6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22,91■■□□□ 1,26
Raet1eQ9CZQ6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22,91■■□□□ 1,26
Raet1eQ9CZQ6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22,9■■□□□ 1,26
Raet1eQ9CZQ6 Gm43445-201ENSMUST00000198564 2091 ntBASIC22,89■■□□□ 1,25
Raet1eQ9CZQ6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22,88■■□□□ 1,25
Raet1eQ9CZQ6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22,88■■□□□ 1,25
Raet1eQ9CZQ6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22,88■■□□□ 1,25
Raet1eQ9CZQ6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22,87■■□□□ 1,25
Raet1eQ9CZQ6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22,87■■□□□ 1,25
Raet1eQ9CZQ6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22,86■■□□□ 1,25
Raet1eQ9CZQ6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22,86■■□□□ 1,25
Raet1eQ9CZQ6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22,85■■□□□ 1,25
Raet1eQ9CZQ6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22,85■■□□□ 1,25
Raet1eQ9CZQ6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22,85■■□□□ 1,25
Raet1eQ9CZQ6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22,85■■□□□ 1,25
Raet1eQ9CZQ6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22,85■■□□□ 1,25
Raet1eQ9CZQ6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22,84■■□□□ 1,25
Raet1eQ9CZQ6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22,84■■□□□ 1,25
Raet1eQ9CZQ6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22,83■■□□□ 1,25
Raet1eQ9CZQ6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22,82■■□□□ 1,24
Raet1eQ9CZQ6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22,81■■□□□ 1,24
Raet1eQ9CZQ6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22,79■■□□□ 1,24
Raet1eQ9CZQ6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22,78■■□□□ 1,24
Raet1eQ9CZQ6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22,78■■□□□ 1,24
Raet1eQ9CZQ6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22,76■■□□□ 1,23
Raet1eQ9CZQ6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22,76■■□□□ 1,23
Raet1eQ9CZQ6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22,74■■□□□ 1,23
Raet1eQ9CZQ6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22,74■■□□□ 1,23
Raet1eQ9CZQ6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22,72■■□□□ 1,23
Raet1eQ9CZQ6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22,72■■□□□ 1,23
Raet1eQ9CZQ6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22,72■■□□□ 1,23
Raet1eQ9CZQ6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22,71■■□□□ 1,23
Raet1eQ9CZQ6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22,7■■□□□ 1,22
Raet1eQ9CZQ6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22,69■■□□□ 1,22
Raet1eQ9CZQ6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22,68■■□□□ 1,22
Raet1eQ9CZQ6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22,68■■□□□ 1,22
Raet1eQ9CZQ6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22,67■■□□□ 1,22
Raet1eQ9CZQ6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22,67■■□□□ 1,22
Raet1eQ9CZQ6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22,65■■□□□ 1,22
Raet1eQ9CZQ6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22,64■■□□□ 1,22
Raet1eQ9CZQ6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22,6■■□□□ 1,21
Raet1eQ9CZQ6 Gm25238-201ENSMUST00000174914 89 ntBASIC22,6■■□□□ 1,21
Raet1eQ9CZQ6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22,58■■□□□ 1,21
Raet1eQ9CZQ6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22,58■■□□□ 1,21
Raet1eQ9CZQ6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22,56■■□□□ 1,2
Raet1eQ9CZQ6 Amer2-203ENSMUST00000225247 2662 ntBASIC22,56■■□□□ 1,2
Raet1eQ9CZQ6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22,55■■□□□ 1,2
Raet1eQ9CZQ6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22,55■■□□□ 1,2
Raet1eQ9CZQ6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22,55■■□□□ 1,2
Raet1eQ9CZQ6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22,55■■□□□ 1,2
Raet1eQ9CZQ6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22,54■■□□□ 1,2
Raet1eQ9CZQ6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22,54■■□□□ 1,2
Raet1eQ9CZQ6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22,52■■□□□ 1,2
Raet1eQ9CZQ6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22,51■■□□□ 1,19
Raet1eQ9CZQ6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22,51■■□□□ 1,19
Raet1eQ9CZQ6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22,51■■□□□ 1,19
Raet1eQ9CZQ6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22,51■■□□□ 1,19
Raet1eQ9CZQ6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22,51■■□□□ 1,19
Raet1eQ9CZQ6 Fezf2-202ENSMUST00000224023 1917 ntBASIC22,51■■□□□ 1,19
Raet1eQ9CZQ6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22,49■■□□□ 1,19
Raet1eQ9CZQ6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22,49■■□□□ 1,19
Raet1eQ9CZQ6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22,49■■□□□ 1,19
Raet1eQ9CZQ6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22,48■■□□□ 1,19
Raet1eQ9CZQ6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22,47■■□□□ 1,19
Raet1eQ9CZQ6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22,46■■□□□ 1,19
Raet1eQ9CZQ6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22,46■■□□□ 1,19
Raet1eQ9CZQ6 Mipep-204ENSMUST00000225043 1548 ntBASIC22,46■■□□□ 1,19
Raet1eQ9CZQ6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22,43■■□□□ 1,18
Raet1eQ9CZQ6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22,43■■□□□ 1,18
Raet1eQ9CZQ6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22,43■■□□□ 1,18
Raet1eQ9CZQ6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22,42■■□□□ 1,18
Raet1eQ9CZQ6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22,42■■□□□ 1,18
Raet1eQ9CZQ6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22,41■■□□□ 1,18
Raet1eQ9CZQ6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22,4■■□□□ 1,18
Raet1eQ9CZQ6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22,39■■□□□ 1,18
Raet1eQ9CZQ6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22,39■■□□□ 1,17
Raet1eQ9CZQ6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22,38■■□□□ 1,17
Raet1eQ9CZQ6 Gm6345-201ENSMUST00000180378 1691 ntBASIC22,38■■□□□ 1,17
Raet1eQ9CZQ6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22,38■■□□□ 1,17
Raet1eQ9CZQ6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22,37■■□□□ 1,17
Raet1eQ9CZQ6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22,36■■□□□ 1,17
Raet1eQ9CZQ6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22,36■■□□□ 1,17
Raet1eQ9CZQ6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22,35■■□□□ 1,17
Raet1eQ9CZQ6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22,33■■□□□ 1,16
Raet1eQ9CZQ6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22,32■■□□□ 1,16
Raet1eQ9CZQ6 Rab21-202ENSMUST00000218831 843 ntBASIC22,32■■□□□ 1,16
Raet1eQ9CZQ6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22,32■■□□□ 1,16
Raet1eQ9CZQ6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22,32■■□□□ 1,16
Raet1eQ9CZQ6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22,31■■□□□ 1,16
Raet1eQ9CZQ6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22,31■■□□□ 1,16
Raet1eQ9CZQ6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22,31■■□□□ 1,16
Raet1eQ9CZQ6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22,29■■□□□ 1,16
Raet1eQ9CZQ6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22,29■■□□□ 1,16
Raet1eQ9CZQ6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22,28■■□□□ 1,16
Raet1eQ9CZQ6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22,28■■□□□ 1,16
Raet1eQ9CZQ6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22,28■■□□□ 1,16
Retrieved 100 of 76,532 protein–RNA pairs in 32,1 ms