Protein–RNA interactions for Protein: Q9CWR8

Dnmt3l, DNA (cytosine-5)-methyltransferase 3-like, mousemouse

Known RBP Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3lQ9CWR8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Dnmt3lQ9CWR8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Dnmt3lQ9CWR8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.87■■□□□ 1.25
Dnmt3lQ9CWR8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Dnmt3lQ9CWR8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Dnmt3lQ9CWR8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Dnmt3lQ9CWR8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Dnmt3lQ9CWR8 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.81■■□□□ 1.24
Dnmt3lQ9CWR8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Dnmt3lQ9CWR8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Dnmt3lQ9CWR8 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.79■■□□□ 1.24
Dnmt3lQ9CWR8 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.78■■□□□ 1.24
Dnmt3lQ9CWR8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Dnmt3lQ9CWR8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Dnmt3lQ9CWR8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Dnmt3lQ9CWR8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Dnmt3lQ9CWR8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.75■■□□□ 1.23
Dnmt3lQ9CWR8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.75■■□□□ 1.23
Dnmt3lQ9CWR8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Dnmt3lQ9CWR8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Dnmt3lQ9CWR8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Dnmt3lQ9CWR8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Dnmt3lQ9CWR8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Dnmt3lQ9CWR8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Dnmt3lQ9CWR8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Dnmt3lQ9CWR8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Dnmt3lQ9CWR8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Dnmt3lQ9CWR8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Dnmt3lQ9CWR8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Dnmt3lQ9CWR8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Dnmt3lQ9CWR8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Dnmt3lQ9CWR8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Dnmt3lQ9CWR8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Dnmt3lQ9CWR8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Dnmt3lQ9CWR8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Dnmt3lQ9CWR8 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.61■■□□□ 1.21
Dnmt3lQ9CWR8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Dnmt3lQ9CWR8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Dnmt3lQ9CWR8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Dnmt3lQ9CWR8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.58■■□□□ 1.21
Dnmt3lQ9CWR8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Dnmt3lQ9CWR8 Gm25262-201ENSMUST00000174934 133 ntBASIC22.55■■□□□ 1.2
Dnmt3lQ9CWR8 Mipep-204ENSMUST00000225043 1548 ntBASIC22.55■■□□□ 1.2
Dnmt3lQ9CWR8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
Dnmt3lQ9CWR8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Dnmt3lQ9CWR8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Dnmt3lQ9CWR8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Dnmt3lQ9CWR8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Dnmt3lQ9CWR8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Dnmt3lQ9CWR8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Dnmt3lQ9CWR8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Dnmt3lQ9CWR8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Dnmt3lQ9CWR8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Dnmt3lQ9CWR8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Dnmt3lQ9CWR8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.47■■□□□ 1.19
Dnmt3lQ9CWR8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Dnmt3lQ9CWR8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Dnmt3lQ9CWR8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Dnmt3lQ9CWR8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Dnmt3lQ9CWR8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Dnmt3lQ9CWR8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Dnmt3lQ9CWR8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Dnmt3lQ9CWR8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Dnmt3lQ9CWR8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Dnmt3lQ9CWR8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
Dnmt3lQ9CWR8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Dnmt3lQ9CWR8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Dnmt3lQ9CWR8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Dnmt3lQ9CWR8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Dnmt3lQ9CWR8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Dnmt3lQ9CWR8 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.33■■□□□ 1.17
Dnmt3lQ9CWR8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Dnmt3lQ9CWR8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Dnmt3lQ9CWR8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Dnmt3lQ9CWR8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Dnmt3lQ9CWR8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Dnmt3lQ9CWR8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Dnmt3lQ9CWR8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Dnmt3lQ9CWR8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Dnmt3lQ9CWR8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Dnmt3lQ9CWR8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.29■■□□□ 1.16
Dnmt3lQ9CWR8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Dnmt3lQ9CWR8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Dnmt3lQ9CWR8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Dnmt3lQ9CWR8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.27■■□□□ 1.16
Dnmt3lQ9CWR8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Dnmt3lQ9CWR8 Amer2-203ENSMUST00000225247 2662 ntBASIC22.26■■□□□ 1.15
Dnmt3lQ9CWR8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Dnmt3lQ9CWR8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Dnmt3lQ9CWR8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Dnmt3lQ9CWR8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Dnmt3lQ9CWR8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Dnmt3lQ9CWR8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.22■■□□□ 1.15
Dnmt3lQ9CWR8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Dnmt3lQ9CWR8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Dnmt3lQ9CWR8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
Dnmt3lQ9CWR8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
Dnmt3lQ9CWR8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Dnmt3lQ9CWR8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Dnmt3lQ9CWR8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms