Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26,05■■□□□ 1,76
Lrrc40Q9CRC8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26,04■■□□□ 1,76
Lrrc40Q9CRC8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26,02■■□□□ 1,76
Lrrc40Q9CRC8 Gm27322-201ENSMUST00000184007 104 ntBASIC26,01■■□□□ 1,75
Lrrc40Q9CRC8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1,75
Lrrc40Q9CRC8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1,75
Lrrc40Q9CRC8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26■■□□□ 1,75
Lrrc40Q9CRC8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26■■□□□ 1,75
Lrrc40Q9CRC8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25,97■■□□□ 1,75
Lrrc40Q9CRC8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25,96■■□□□ 1,75
Lrrc40Q9CRC8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25,95■■□□□ 1,74
Lrrc40Q9CRC8 AC166822.3-201ENSMUST00000227394 661 ntBASIC25,95■■□□□ 1,74
Lrrc40Q9CRC8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25,92■■□□□ 1,74
Lrrc40Q9CRC8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25,9■■□□□ 1,74
Lrrc40Q9CRC8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25,89■■□□□ 1,74
Lrrc40Q9CRC8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25,87■■□□□ 1,73
Lrrc40Q9CRC8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25,86■■□□□ 1,73
Lrrc40Q9CRC8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25,83■■□□□ 1,73
Lrrc40Q9CRC8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25,83■■□□□ 1,73
Lrrc40Q9CRC8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25,83■■□□□ 1,72
Lrrc40Q9CRC8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25,82■■□□□ 1,72
Lrrc40Q9CRC8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25,81■■□□□ 1,72
Lrrc40Q9CRC8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25,81■■□□□ 1,72
Lrrc40Q9CRC8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25,8■■□□□ 1,72
Lrrc40Q9CRC8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25,8■■□□□ 1,72
Lrrc40Q9CRC8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25,77■■□□□ 1,72
Lrrc40Q9CRC8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25,77■■□□□ 1,72
Lrrc40Q9CRC8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25,77■■□□□ 1,72
Lrrc40Q9CRC8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25,76■■□□□ 1,71
Lrrc40Q9CRC8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25,76■■□□□ 1,71
Lrrc40Q9CRC8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25,76■■□□□ 1,71
Lrrc40Q9CRC8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25,74■■□□□ 1,71
Lrrc40Q9CRC8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25,74■■□□□ 1,71
Lrrc40Q9CRC8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25,74■■□□□ 1,71
Lrrc40Q9CRC8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25,74■■□□□ 1,71
Lrrc40Q9CRC8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25,73■■□□□ 1,71
Lrrc40Q9CRC8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25,71■■□□□ 1,71
Lrrc40Q9CRC8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25,71■■□□□ 1,71
Lrrc40Q9CRC8 Gm26115-201ENSMUST00000175605 87 ntBASIC25,71■■□□□ 1,71
Lrrc40Q9CRC8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25,7■■□□□ 1,71
Lrrc40Q9CRC8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25,7■■□□□ 1,7
Lrrc40Q9CRC8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25,68■■□□□ 1,7
Lrrc40Q9CRC8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25,68■■□□□ 1,7
Lrrc40Q9CRC8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25,68■■□□□ 1,7
Lrrc40Q9CRC8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25,67■■□□□ 1,7
Lrrc40Q9CRC8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25,64■■□□□ 1,7
Lrrc40Q9CRC8 Gm8109-201ENSMUST00000194076 746 ntBASIC25,64■■□□□ 1,7
Lrrc40Q9CRC8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25,62■■□□□ 1,69
Lrrc40Q9CRC8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25,62■■□□□ 1,69
Lrrc40Q9CRC8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25,61■■□□□ 1,69
Lrrc40Q9CRC8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25,6■■□□□ 1,69
Lrrc40Q9CRC8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25,6■■□□□ 1,69
Lrrc40Q9CRC8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25,59■■□□□ 1,69
Lrrc40Q9CRC8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25,59■■□□□ 1,69
Lrrc40Q9CRC8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25,58■■□□□ 1,69
Lrrc40Q9CRC8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25,56■■□□□ 1,68
Lrrc40Q9CRC8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25,56■■□□□ 1,68
Lrrc40Q9CRC8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25,56■■□□□ 1,68
Lrrc40Q9CRC8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25,55■■□□□ 1,68
Lrrc40Q9CRC8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25,53■■□□□ 1,68
Lrrc40Q9CRC8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25,53■■□□□ 1,68
Lrrc40Q9CRC8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25,51■■□□□ 1,67
Lrrc40Q9CRC8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25,51■■□□□ 1,67
Lrrc40Q9CRC8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25,49■■□□□ 1,67
Lrrc40Q9CRC8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25,48■■□□□ 1,67
Lrrc40Q9CRC8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25,46■■□□□ 1,67
Lrrc40Q9CRC8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
Lrrc40Q9CRC8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25,44■■□□□ 1,66
Lrrc40Q9CRC8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25,42■■□□□ 1,66
Lrrc40Q9CRC8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25,41■■□□□ 1,66
Lrrc40Q9CRC8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25,4■■□□□ 1,66
Lrrc40Q9CRC8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25,4■■□□□ 1,66
Lrrc40Q9CRC8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25,4■■□□□ 1,66
Lrrc40Q9CRC8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25,4■■□□□ 1,66
Lrrc40Q9CRC8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25,38■■□□□ 1,65
Lrrc40Q9CRC8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25,38■■□□□ 1,65
Lrrc40Q9CRC8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25,38■■□□□ 1,65
Lrrc40Q9CRC8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25,38■■□□□ 1,65
Lrrc40Q9CRC8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25,37■■□□□ 1,65
Lrrc40Q9CRC8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25,37■■□□□ 1,65
Lrrc40Q9CRC8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25,36■■□□□ 1,65
Lrrc40Q9CRC8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25,36■■□□□ 1,65
Lrrc40Q9CRC8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25,35■■□□□ 1,65
Lrrc40Q9CRC8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25,35■■□□□ 1,65
Lrrc40Q9CRC8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25,34■■□□□ 1,65
Lrrc40Q9CRC8 Peli2-204ENSMUST00000226513 1320 ntBASIC25,34■■□□□ 1,65
Lrrc40Q9CRC8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25,33■■□□□ 1,65
Lrrc40Q9CRC8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25,33■■□□□ 1,65
Lrrc40Q9CRC8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25,33■■□□□ 1,65
Lrrc40Q9CRC8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25,33■■□□□ 1,65
Lrrc40Q9CRC8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25,32■■□□□ 1,64
Lrrc40Q9CRC8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25,32■■□□□ 1,64
Lrrc40Q9CRC8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25,32■■□□□ 1,64
Lrrc40Q9CRC8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25,32■■□□□ 1,64
Lrrc40Q9CRC8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25,31■■□□□ 1,64
Lrrc40Q9CRC8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25,31■■□□□ 1,64
Lrrc40Q9CRC8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25,3■■□□□ 1,64
Lrrc40Q9CRC8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25,28■■□□□ 1,64
Lrrc40Q9CRC8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25,28■■□□□ 1,64
Lrrc40Q9CRC8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25,26■■□□□ 1,63
Retrieved 100 of 76,532 protein–RNA pairs in 12,3 ms