Protein–RNA interactions for Protein: Q9CQJ4

Rnf2, E3 ubiquitin-protein ligase RING2, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf2Q9CQJ4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf2Q9CQJ4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf2Q9CQJ4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf2Q9CQJ4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.53■□□□□ 0.88
Rnf2Q9CQJ4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf2Q9CQJ4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.52■□□□□ 0.88
Rnf2Q9CQJ4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rnf2Q9CQJ4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf2Q9CQJ4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf2Q9CQJ4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Rnf2Q9CQJ4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf2Q9CQJ4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf2Q9CQJ4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf2Q9CQJ4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf2Q9CQJ4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf2Q9CQJ4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf2Q9CQJ4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf2Q9CQJ4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.45■□□□□ 0.86
Rnf2Q9CQJ4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf2Q9CQJ4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rnf2Q9CQJ4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf2Q9CQJ4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf2Q9CQJ4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf2Q9CQJ4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf2Q9CQJ4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf2Q9CQJ4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.41■□□□□ 0.86
Rnf2Q9CQJ4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rnf2Q9CQJ4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf2Q9CQJ4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rnf2Q9CQJ4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf2Q9CQJ4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.38■□□□□ 0.85
Rnf2Q9CQJ4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rnf2Q9CQJ4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf2Q9CQJ4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf2Q9CQJ4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rnf2Q9CQJ4 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.35■□□□□ 0.85
Rnf2Q9CQJ4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rnf2Q9CQJ4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf2Q9CQJ4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rnf2Q9CQJ4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rnf2Q9CQJ4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rnf2Q9CQJ4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf2Q9CQJ4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf2Q9CQJ4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf2Q9CQJ4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf2Q9CQJ4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rnf2Q9CQJ4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rnf2Q9CQJ4 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.27■□□□□ 0.84
Rnf2Q9CQJ4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rnf2Q9CQJ4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.26■□□□□ 0.83
Rnf2Q9CQJ4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf2Q9CQJ4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf2Q9CQJ4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rnf2Q9CQJ4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf2Q9CQJ4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rnf2Q9CQJ4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rnf2Q9CQJ4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rnf2Q9CQJ4 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.22■□□□□ 0.83
Rnf2Q9CQJ4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf2Q9CQJ4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf2Q9CQJ4 Gm26115-201ENSMUST00000175605 87 ntBASIC20.19■□□□□ 0.82
Rnf2Q9CQJ4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rnf2Q9CQJ4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Rnf2Q9CQJ4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf2Q9CQJ4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf2Q9CQJ4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Rnf2Q9CQJ4 Gm27322-201ENSMUST00000184007 104 ntBASIC20.17■□□□□ 0.82
Rnf2Q9CQJ4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf2Q9CQJ4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf2Q9CQJ4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Rnf2Q9CQJ4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf2Q9CQJ4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf2Q9CQJ4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.15■□□□□ 0.82
Rnf2Q9CQJ4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rnf2Q9CQJ4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf2Q9CQJ4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf2Q9CQJ4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf2Q9CQJ4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rnf2Q9CQJ4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf2Q9CQJ4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf2Q9CQJ4 Gm8109-201ENSMUST00000194076 746 ntBASIC20.13■□□□□ 0.81
Rnf2Q9CQJ4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Rnf2Q9CQJ4 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.12■□□□□ 0.81
Rnf2Q9CQJ4 Mipep-204ENSMUST00000225043 1548 ntBASIC20.12■□□□□ 0.81
Rnf2Q9CQJ4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf2Q9CQJ4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf2Q9CQJ4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
Rnf2Q9CQJ4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf2Q9CQJ4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf2Q9CQJ4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.09■□□□□ 0.81
Rnf2Q9CQJ4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf2Q9CQJ4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf2Q9CQJ4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf2Q9CQJ4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf2Q9CQJ4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Rnf2Q9CQJ4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf2Q9CQJ4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rnf2Q9CQJ4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf2Q9CQJ4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf2Q9CQJ4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms