Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Mipep-204ENSMUST00000225043 1548 ntBASIC27.55■■■□□ 2
Pcdha1Q91Y21 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Pcdha1Q91Y21 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■■□□ 2
Pcdha1Q91Y21 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
Pcdha1Q91Y21 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
Pcdha1Q91Y21 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Pcdha1Q91Y21 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
Pcdha1Q91Y21 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Pcdha1Q91Y21 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Pcdha1Q91Y21 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Pcdha1Q91Y21 Peli2-204ENSMUST00000226513 1320 ntBASIC27.46■■□□□ 1.99
Pcdha1Q91Y21 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Pcdha1Q91Y21 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Pcdha1Q91Y21 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.43■■□□□ 1.98
Pcdha1Q91Y21 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Pcdha1Q91Y21 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
Pcdha1Q91Y21 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Pcdha1Q91Y21 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Pcdha1Q91Y21 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Pcdha1Q91Y21 Gm16148-201ENSMUST00000119653 893 ntBASIC27.39■■□□□ 1.98
Pcdha1Q91Y21 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
Pcdha1Q91Y21 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Pcdha1Q91Y21 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Pcdha1Q91Y21 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Pcdha1Q91Y21 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Pcdha1Q91Y21 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.34■■□□□ 1.97
Pcdha1Q91Y21 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Pcdha1Q91Y21 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pcdha1Q91Y21 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.31■■□□□ 1.96
Pcdha1Q91Y21 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Pcdha1Q91Y21 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Pcdha1Q91Y21 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.28■■□□□ 1.96
Pcdha1Q91Y21 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Pcdha1Q91Y21 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
Pcdha1Q91Y21 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Pcdha1Q91Y21 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Pcdha1Q91Y21 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pcdha1Q91Y21 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.21■■□□□ 1.95
Pcdha1Q91Y21 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.18■■□□□ 1.94
Pcdha1Q91Y21 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Pcdha1Q91Y21 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Pcdha1Q91Y21 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Pcdha1Q91Y21 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.15■■□□□ 1.94
Pcdha1Q91Y21 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Pcdha1Q91Y21 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Pcdha1Q91Y21 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Pcdha1Q91Y21 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.09■■□□□ 1.93
Pcdha1Q91Y21 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Pcdha1Q91Y21 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Pcdha1Q91Y21 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Pcdha1Q91Y21 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Pcdha1Q91Y21 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC27.05■■□□□ 1.92
Pcdha1Q91Y21 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
Pcdha1Q91Y21 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.04■■□□□ 1.92
Pcdha1Q91Y21 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.04■■□□□ 1.92
Pcdha1Q91Y21 Tdp2-203ENSMUST00000223804 1136 ntBASIC27■■□□□ 1.91
Pcdha1Q91Y21 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdha1Q91Y21 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdha1Q91Y21 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdha1Q91Y21 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Pcdha1Q91Y21 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Pcdha1Q91Y21 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.94■■□□□ 1.9
Pcdha1Q91Y21 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdha1Q91Y21 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
Pcdha1Q91Y21 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Pcdha1Q91Y21 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.89■■□□□ 1.89
Pcdha1Q91Y21 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Pcdha1Q91Y21 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pcdha1Q91Y21 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.88■■□□□ 1.89
Pcdha1Q91Y21 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
Pcdha1Q91Y21 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Pcdha1Q91Y21 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdha1Q91Y21 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdha1Q91Y21 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Pcdha1Q91Y21 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Pcdha1Q91Y21 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
Pcdha1Q91Y21 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
Pcdha1Q91Y21 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.8■■□□□ 1.88
Pcdha1Q91Y21 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Pcdha1Q91Y21 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdha1Q91Y21 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdha1Q91Y21 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdha1Q91Y21 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.77■■□□□ 1.88
Pcdha1Q91Y21 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdha1Q91Y21 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
Pcdha1Q91Y21 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.75■■□□□ 1.87
Pcdha1Q91Y21 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pcdha1Q91Y21 Gm45855-201ENSMUST00000212546 880 ntBASIC26.7■■□□□ 1.86
Pcdha1Q91Y21 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Pcdha1Q91Y21 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdha1Q91Y21 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdha1Q91Y21 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdha1Q91Y21 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Pcdha1Q91Y21 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Pcdha1Q91Y21 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Pcdha1Q91Y21 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Pcdha1Q91Y21 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdha1Q91Y21 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.66■■□□□ 1.86
Pcdha1Q91Y21 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdha1Q91Y21 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms