Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Gm27322-201ENSMUST00000184007 104 ntBASIC25.53■■□□□ 1.68
Pcdhb8Q91XZ2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.52■■□□□ 1.68
Pcdhb8Q91XZ2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdhb8Q91XZ2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb8Q91XZ2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.49■■□□□ 1.67
Pcdhb8Q91XZ2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.49■■□□□ 1.67
Pcdhb8Q91XZ2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.48■■□□□ 1.67
Pcdhb8Q91XZ2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
Pcdhb8Q91XZ2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdhb8Q91XZ2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdhb8Q91XZ2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Pcdhb8Q91XZ2 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.42■■□□□ 1.66
Pcdhb8Q91XZ2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhb8Q91XZ2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb8Q91XZ2 Gm26115-201ENSMUST00000175605 87 ntBASIC25.35■■□□□ 1.65
Pcdhb8Q91XZ2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhb8Q91XZ2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdhb8Q91XZ2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Pcdhb8Q91XZ2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhb8Q91XZ2 Gm8109-201ENSMUST00000194076 746 ntBASIC25.3■■□□□ 1.64
Pcdhb8Q91XZ2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhb8Q91XZ2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhb8Q91XZ2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhb8Q91XZ2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhb8Q91XZ2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhb8Q91XZ2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhb8Q91XZ2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhb8Q91XZ2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdhb8Q91XZ2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhb8Q91XZ2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdhb8Q91XZ2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhb8Q91XZ2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Pcdhb8Q91XZ2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
Pcdhb8Q91XZ2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhb8Q91XZ2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdhb8Q91XZ2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhb8Q91XZ2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhb8Q91XZ2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhb8Q91XZ2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhb8Q91XZ2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhb8Q91XZ2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhb8Q91XZ2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.11■■□□□ 1.61
Pcdhb8Q91XZ2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.11■■□□□ 1.61
Pcdhb8Q91XZ2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhb8Q91XZ2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhb8Q91XZ2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Pcdhb8Q91XZ2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhb8Q91XZ2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.05■■□□□ 1.6
Pcdhb8Q91XZ2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhb8Q91XZ2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
Pcdhb8Q91XZ2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhb8Q91XZ2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhb8Q91XZ2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb8Q91XZ2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb8Q91XZ2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhb8Q91XZ2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhb8Q91XZ2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhb8Q91XZ2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pcdhb8Q91XZ2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhb8Q91XZ2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhb8Q91XZ2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhb8Q91XZ2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhb8Q91XZ2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhb8Q91XZ2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdhb8Q91XZ2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.93■■□□□ 1.58
Pcdhb8Q91XZ2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhb8Q91XZ2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhb8Q91XZ2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhb8Q91XZ2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhb8Q91XZ2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhb8Q91XZ2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhb8Q91XZ2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhb8Q91XZ2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhb8Q91XZ2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhb8Q91XZ2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhb8Q91XZ2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhb8Q91XZ2 Peli2-204ENSMUST00000226513 1320 ntBASIC24.84■■□□□ 1.57
Pcdhb8Q91XZ2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhb8Q91XZ2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhb8Q91XZ2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.83■■□□□ 1.57
Pcdhb8Q91XZ2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.83■■□□□ 1.57
Pcdhb8Q91XZ2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb8Q91XZ2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.81■■□□□ 1.56
Pcdhb8Q91XZ2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Pcdhb8Q91XZ2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhb8Q91XZ2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhb8Q91XZ2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Pcdhb8Q91XZ2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhb8Q91XZ2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Pcdhb8Q91XZ2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
Pcdhb8Q91XZ2 Zxda-201ENSMUST00000117281 2621 ntBASIC24.77■■□□□ 1.56
Pcdhb8Q91XZ2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.77■■□□□ 1.56
Pcdhb8Q91XZ2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhb8Q91XZ2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhb8Q91XZ2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhb8Q91XZ2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Pcdhb8Q91XZ2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhb8Q91XZ2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhb8Q91XZ2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.75■■□□□ 1.55
Pcdhb8Q91XZ2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms