Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Nkd2Q8VE28 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Nkd2Q8VE28 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Nkd2Q8VE28 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
Nkd2Q8VE28 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Nkd2Q8VE28 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Nkd2Q8VE28 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Nkd2Q8VE28 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Nkd2Q8VE28 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.52■■□□□ 1.36
Nkd2Q8VE28 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Nkd2Q8VE28 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Nkd2Q8VE28 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Nkd2Q8VE28 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.46■■□□□ 1.35
Nkd2Q8VE28 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Nkd2Q8VE28 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Nkd2Q8VE28 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.45■■□□□ 1.34
Nkd2Q8VE28 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.43■■□□□ 1.34
Nkd2Q8VE28 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Nkd2Q8VE28 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.42■■□□□ 1.34
Nkd2Q8VE28 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Nkd2Q8VE28 Gm16148-201ENSMUST00000119653 893 ntBASIC23.37■■□□□ 1.33
Nkd2Q8VE28 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Nkd2Q8VE28 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Nkd2Q8VE28 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Nkd2Q8VE28 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Nkd2Q8VE28 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Nkd2Q8VE28 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nkd2Q8VE28 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nkd2Q8VE28 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.28■■□□□ 1.32
Nkd2Q8VE28 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Nkd2Q8VE28 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
Nkd2Q8VE28 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Nkd2Q8VE28 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Nkd2Q8VE28 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Nkd2Q8VE28 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Nkd2Q8VE28 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Nkd2Q8VE28 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Nkd2Q8VE28 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Nkd2Q8VE28 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Nkd2Q8VE28 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Nkd2Q8VE28 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Nkd2Q8VE28 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Nkd2Q8VE28 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.21■■□□□ 1.31
Nkd2Q8VE28 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Nkd2Q8VE28 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.21■■□□□ 1.31
Nkd2Q8VE28 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.2■■□□□ 1.3
Nkd2Q8VE28 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Nkd2Q8VE28 Peli2-204ENSMUST00000226513 1320 ntBASIC23.17■■□□□ 1.3
Nkd2Q8VE28 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Nkd2Q8VE28 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Nkd2Q8VE28 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Nkd2Q8VE28 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Nkd2Q8VE28 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Nkd2Q8VE28 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Nkd2Q8VE28 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Nkd2Q8VE28 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.14■■□□□ 1.29
Nkd2Q8VE28 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
Nkd2Q8VE28 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Nkd2Q8VE28 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Nkd2Q8VE28 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Nkd2Q8VE28 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Nkd2Q8VE28 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Nkd2Q8VE28 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Nkd2Q8VE28 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Nkd2Q8VE28 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Nkd2Q8VE28 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Nkd2Q8VE28 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.05■■□□□ 1.28
Nkd2Q8VE28 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.05■■□□□ 1.28
Nkd2Q8VE28 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Nkd2Q8VE28 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.02■■□□□ 1.28
Nkd2Q8VE28 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Nkd2Q8VE28 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.01■■□□□ 1.27
Nkd2Q8VE28 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Nkd2Q8VE28 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Nkd2Q8VE28 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Nkd2Q8VE28 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Nkd2Q8VE28 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Nkd2Q8VE28 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Nkd2Q8VE28 Mipep-204ENSMUST00000225043 1548 ntBASIC22.96■■□□□ 1.27
Nkd2Q8VE28 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.95■■□□□ 1.26
Nkd2Q8VE28 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Nkd2Q8VE28 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Nkd2Q8VE28 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Nkd2Q8VE28 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Nkd2Q8VE28 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Nkd2Q8VE28 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Nkd2Q8VE28 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.92■■□□□ 1.26
Nkd2Q8VE28 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Nkd2Q8VE28 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Nkd2Q8VE28 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Nkd2Q8VE28 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.88■■□□□ 1.25
Nkd2Q8VE28 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Nkd2Q8VE28 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Nkd2Q8VE28 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.87■■□□□ 1.25
Nkd2Q8VE28 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Nkd2Q8VE28 Gm45855-201ENSMUST00000212546 880 ntBASIC22.85■■□□□ 1.25
Nkd2Q8VE28 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Nkd2Q8VE28 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Nkd2Q8VE28 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Nkd2Q8VE28 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms