Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Gtf3c5Q8R2T8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Gtf3c5Q8R2T8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.51■■■□□ 2.47
Gtf3c5Q8R2T8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.5■■■□□ 2.47
Gtf3c5Q8R2T8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Gtf3c5Q8R2T8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
Gtf3c5Q8R2T8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Gtf3c5Q8R2T8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Gtf3c5Q8R2T8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
Gtf3c5Q8R2T8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Gtf3c5Q8R2T8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Gtf3c5Q8R2T8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Gtf3c5Q8R2T8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Gtf3c5Q8R2T8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Gtf3c5Q8R2T8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Gtf3c5Q8R2T8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Gtf3c5Q8R2T8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Gtf3c5Q8R2T8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Gtf3c5Q8R2T8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Gtf3c5Q8R2T8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Gtf3c5Q8R2T8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
Gtf3c5Q8R2T8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
Gtf3c5Q8R2T8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
Gtf3c5Q8R2T8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Gtf3c5Q8R2T8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Gtf3c5Q8R2T8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Gtf3c5Q8R2T8 Peli2-204ENSMUST00000226513 1320 ntBASIC30.23■■■□□ 2.43
Gtf3c5Q8R2T8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Gtf3c5Q8R2T8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Gtf3c5Q8R2T8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.23■■■□□ 2.43
Gtf3c5Q8R2T8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.23■■■□□ 2.43
Gtf3c5Q8R2T8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Gtf3c5Q8R2T8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Gtf3c5Q8R2T8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Gtf3c5Q8R2T8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Gtf3c5Q8R2T8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Gtf3c5Q8R2T8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
Gtf3c5Q8R2T8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.14■■■□□ 2.42
Gtf3c5Q8R2T8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Gtf3c5Q8R2T8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Gtf3c5Q8R2T8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Gtf3c5Q8R2T8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
Gtf3c5Q8R2T8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
Gtf3c5Q8R2T8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Gtf3c5Q8R2T8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Gtf3c5Q8R2T8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Gtf3c5Q8R2T8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Gtf3c5Q8R2T8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Gtf3c5Q8R2T8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Gtf3c5Q8R2T8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
Gtf3c5Q8R2T8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Gtf3c5Q8R2T8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.01■■■□□ 2.39
Gtf3c5Q8R2T8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.01■■■□□ 2.39
Gtf3c5Q8R2T8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Gtf3c5Q8R2T8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30■■■□□ 2.39
Gtf3c5Q8R2T8 Gm16148-201ENSMUST00000119653 893 ntBASIC30■■■□□ 2.39
Gtf3c5Q8R2T8 Gm2415-204ENSMUST00000190235 2004 ntBASIC29.98■■■□□ 2.39
Gtf3c5Q8R2T8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Gtf3c5Q8R2T8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Gtf3c5Q8R2T8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Gtf3c5Q8R2T8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Gtf3c5Q8R2T8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Gtf3c5Q8R2T8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.92■■■□□ 2.38
Gtf3c5Q8R2T8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Gtf3c5Q8R2T8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Gtf3c5Q8R2T8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Gtf3c5Q8R2T8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC29.9■■■□□ 2.38
Gtf3c5Q8R2T8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Gtf3c5Q8R2T8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Gtf3c5Q8R2T8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Gtf3c5Q8R2T8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Gtf3c5Q8R2T8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
Gtf3c5Q8R2T8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
Gtf3c5Q8R2T8 Gm6658-202ENSMUST00000209493 1885 ntBASIC29.81■■■□□ 2.36
Gtf3c5Q8R2T8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC29.8■■■□□ 2.36
Gtf3c5Q8R2T8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Gtf3c5Q8R2T8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC29.78■■■□□ 2.36
Gtf3c5Q8R2T8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Gtf3c5Q8R2T8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.76■■■□□ 2.36
Gtf3c5Q8R2T8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Gtf3c5Q8R2T8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29.75■■■□□ 2.35
Gtf3c5Q8R2T8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29.73■■■□□ 2.35
Gtf3c5Q8R2T8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
Gtf3c5Q8R2T8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Gtf3c5Q8R2T8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29.72■■■□□ 2.35
Gtf3c5Q8R2T8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Gtf3c5Q8R2T8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Gtf3c5Q8R2T8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Gtf3c5Q8R2T8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Gtf3c5Q8R2T8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Gtf3c5Q8R2T8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Gtf3c5Q8R2T8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Gtf3c5Q8R2T8 Zfp131-205ENSMUST00000223812 663 ntBASIC29.62■■■□□ 2.33
Gtf3c5Q8R2T8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
Gtf3c5Q8R2T8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
Gtf3c5Q8R2T8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29.59■■■□□ 2.33
Gtf3c5Q8R2T8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Gtf3c5Q8R2T8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC29.58■■■□□ 2.33
Gtf3c5Q8R2T8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
Gtf3c5Q8R2T8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.57■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms