Protein–RNA interactions for Protein: Q8R2C6

Vmn1r21, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r21Q8R2C6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Vmn1r21Q8R2C6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Vmn1r21Q8R2C6 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.65■■□□□ 1.22
Vmn1r21Q8R2C6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.65■■□□□ 1.22
Vmn1r21Q8R2C6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
Vmn1r21Q8R2C6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Vmn1r21Q8R2C6 Mipep-204ENSMUST00000225043 1548 ntBASIC22.63■■□□□ 1.21
Vmn1r21Q8R2C6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Vmn1r21Q8R2C6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Vmn1r21Q8R2C6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Vmn1r21Q8R2C6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Vmn1r21Q8R2C6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Vmn1r21Q8R2C6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Vmn1r21Q8R2C6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Vmn1r21Q8R2C6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
Vmn1r21Q8R2C6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Vmn1r21Q8R2C6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.55■■□□□ 1.2
Vmn1r21Q8R2C6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Vmn1r21Q8R2C6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Vmn1r21Q8R2C6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Vmn1r21Q8R2C6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Vmn1r21Q8R2C6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Vmn1r21Q8R2C6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Vmn1r21Q8R2C6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Vmn1r21Q8R2C6 Gm25262-201ENSMUST00000174934 133 ntBASIC22.46■■□□□ 1.19
Vmn1r21Q8R2C6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Vmn1r21Q8R2C6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Vmn1r21Q8R2C6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Vmn1r21Q8R2C6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Vmn1r21Q8R2C6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Vmn1r21Q8R2C6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Vmn1r21Q8R2C6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.38■■□□□ 1.17
Vmn1r21Q8R2C6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vmn1r21Q8R2C6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vmn1r21Q8R2C6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Vmn1r21Q8R2C6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Vmn1r21Q8R2C6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Vmn1r21Q8R2C6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Vmn1r21Q8R2C6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Vmn1r21Q8R2C6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Vmn1r21Q8R2C6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Vmn1r21Q8R2C6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Vmn1r21Q8R2C6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
Vmn1r21Q8R2C6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vmn1r21Q8R2C6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vmn1r21Q8R2C6 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.31■■□□□ 1.16
Vmn1r21Q8R2C6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.28■■□□□ 1.16
Vmn1r21Q8R2C6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.28■■□□□ 1.16
Vmn1r21Q8R2C6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Vmn1r21Q8R2C6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Vmn1r21Q8R2C6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Vmn1r21Q8R2C6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vmn1r21Q8R2C6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
Vmn1r21Q8R2C6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Vmn1r21Q8R2C6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Vmn1r21Q8R2C6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Vmn1r21Q8R2C6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.24■■□□□ 1.15
Vmn1r21Q8R2C6 Zxda-201ENSMUST00000117281 2621 ntBASIC22.24■■□□□ 1.15
Vmn1r21Q8R2C6 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.22■■□□□ 1.15
Vmn1r21Q8R2C6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r21Q8R2C6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vmn1r21Q8R2C6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22.19■■□□□ 1.14
Vmn1r21Q8R2C6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Vmn1r21Q8R2C6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.17■■□□□ 1.14
Vmn1r21Q8R2C6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Vmn1r21Q8R2C6 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.15■■□□□ 1.14
Vmn1r21Q8R2C6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Vmn1r21Q8R2C6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Vmn1r21Q8R2C6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Vmn1r21Q8R2C6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Vmn1r21Q8R2C6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Vmn1r21Q8R2C6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Vmn1r21Q8R2C6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.12■■□□□ 1.13
Vmn1r21Q8R2C6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vmn1r21Q8R2C6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Vmn1r21Q8R2C6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.1■■□□□ 1.13
Vmn1r21Q8R2C6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Vmn1r21Q8R2C6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Vmn1r21Q8R2C6 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.09■■□□□ 1.13
Vmn1r21Q8R2C6 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.09■■□□□ 1.13
Vmn1r21Q8R2C6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Vmn1r21Q8R2C6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Vmn1r21Q8R2C6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
Vmn1r21Q8R2C6 Gm27322-201ENSMUST00000184007 104 ntBASIC22.08■■□□□ 1.13
Vmn1r21Q8R2C6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.06■■□□□ 1.12
Vmn1r21Q8R2C6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Vmn1r21Q8R2C6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Vmn1r21Q8R2C6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Vmn1r21Q8R2C6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Vmn1r21Q8R2C6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Vmn1r21Q8R2C6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vmn1r21Q8R2C6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22■■□□□ 1.11
Vmn1r21Q8R2C6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22■■□□□ 1.11
Vmn1r21Q8R2C6 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.98■■□□□ 1.11
Vmn1r21Q8R2C6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Vmn1r21Q8R2C6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vmn1r21Q8R2C6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vmn1r21Q8R2C6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Vmn1r21Q8R2C6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vmn1r21Q8R2C6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms