Protein–RNA interactions for Protein: Q8R2C2

Vmn1r8, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r8Q8R2C2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Vmn1r8Q8R2C2 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.83■■□□□ 1.25
Vmn1r8Q8R2C2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Vmn1r8Q8R2C2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Vmn1r8Q8R2C2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.79■■□□□ 1.24
Vmn1r8Q8R2C2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
Vmn1r8Q8R2C2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Vmn1r8Q8R2C2 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.75■■□□□ 1.23
Vmn1r8Q8R2C2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Vmn1r8Q8R2C2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
Vmn1r8Q8R2C2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Vmn1r8Q8R2C2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Vmn1r8Q8R2C2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Vmn1r8Q8R2C2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Vmn1r8Q8R2C2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Vmn1r8Q8R2C2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Vmn1r8Q8R2C2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Vmn1r8Q8R2C2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
Vmn1r8Q8R2C2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Vmn1r8Q8R2C2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Vmn1r8Q8R2C2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Vmn1r8Q8R2C2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Vmn1r8Q8R2C2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Vmn1r8Q8R2C2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Vmn1r8Q8R2C2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Vmn1r8Q8R2C2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Vmn1r8Q8R2C2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.53■■□□□ 1.2
Vmn1r8Q8R2C2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Vmn1r8Q8R2C2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Vmn1r8Q8R2C2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Vmn1r8Q8R2C2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Vmn1r8Q8R2C2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
Vmn1r8Q8R2C2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Vmn1r8Q8R2C2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Vmn1r8Q8R2C2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Vmn1r8Q8R2C2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Vmn1r8Q8R2C2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Vmn1r8Q8R2C2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Vmn1r8Q8R2C2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Vmn1r8Q8R2C2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Vmn1r8Q8R2C2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Vmn1r8Q8R2C2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Vmn1r8Q8R2C2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Vmn1r8Q8R2C2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.43■■□□□ 1.18
Vmn1r8Q8R2C2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Vmn1r8Q8R2C2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.42■■□□□ 1.18
Vmn1r8Q8R2C2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Vmn1r8Q8R2C2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Vmn1r8Q8R2C2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Vmn1r8Q8R2C2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Vmn1r8Q8R2C2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.41■■□□□ 1.18
Vmn1r8Q8R2C2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Vmn1r8Q8R2C2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Vmn1r8Q8R2C2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Vmn1r8Q8R2C2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Vmn1r8Q8R2C2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.36■■□□□ 1.17
Vmn1r8Q8R2C2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Vmn1r8Q8R2C2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Vmn1r8Q8R2C2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Vmn1r8Q8R2C2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.32■■□□□ 1.16
Vmn1r8Q8R2C2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vmn1r8Q8R2C2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vmn1r8Q8R2C2 Peli2-204ENSMUST00000226513 1320 ntBASIC22.31■■□□□ 1.16
Vmn1r8Q8R2C2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Vmn1r8Q8R2C2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.29■■□□□ 1.16
Vmn1r8Q8R2C2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
Vmn1r8Q8R2C2 Gm24804-201ENSMUST00000174982 85 ntBASIC22.29■■□□□ 1.16
Vmn1r8Q8R2C2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vmn1r8Q8R2C2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vmn1r8Q8R2C2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Vmn1r8Q8R2C2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Vmn1r8Q8R2C2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vmn1r8Q8R2C2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vmn1r8Q8R2C2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vmn1r8Q8R2C2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.24■■□□□ 1.15
Vmn1r8Q8R2C2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Vmn1r8Q8R2C2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r8Q8R2C2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r8Q8R2C2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r8Q8R2C2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vmn1r8Q8R2C2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vmn1r8Q8R2C2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vmn1r8Q8R2C2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vmn1r8Q8R2C2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vmn1r8Q8R2C2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.19■■□□□ 1.14
Vmn1r8Q8R2C2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r8Q8R2C2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r8Q8R2C2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r8Q8R2C2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r8Q8R2C2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
Vmn1r8Q8R2C2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Vmn1r8Q8R2C2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Vmn1r8Q8R2C2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.12■■□□□ 1.13
Vmn1r8Q8R2C2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Vmn1r8Q8R2C2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.12■■□□□ 1.13
Vmn1r8Q8R2C2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Vmn1r8Q8R2C2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vmn1r8Q8R2C2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vmn1r8Q8R2C2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.1■■□□□ 1.13
Vmn1r8Q8R2C2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms