Protein–RNA interactions for Protein: Q8CF20

1700020N01Rik, RIKEN cDNA 1700020N01, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700020N01RikQ8CF20 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
1700020N01RikQ8CF20 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.17■■□□□ 1.46
1700020N01RikQ8CF20 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
1700020N01RikQ8CF20 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
1700020N01RikQ8CF20 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
1700020N01RikQ8CF20 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
1700020N01RikQ8CF20 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
1700020N01RikQ8CF20 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
1700020N01RikQ8CF20 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
1700020N01RikQ8CF20 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
1700020N01RikQ8CF20 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.1■■□□□ 1.45
1700020N01RikQ8CF20 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
1700020N01RikQ8CF20 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
1700020N01RikQ8CF20 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
1700020N01RikQ8CF20 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
1700020N01RikQ8CF20 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
1700020N01RikQ8CF20 Zxda-201ENSMUST00000117281 2621 ntBASIC24.07■■□□□ 1.44
1700020N01RikQ8CF20 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
1700020N01RikQ8CF20 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
1700020N01RikQ8CF20 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
1700020N01RikQ8CF20 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
1700020N01RikQ8CF20 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
1700020N01RikQ8CF20 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
1700020N01RikQ8CF20 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24■■□□□ 1.43
1700020N01RikQ8CF20 Mipep-204ENSMUST00000225043 1548 ntBASIC24■■□□□ 1.43
1700020N01RikQ8CF20 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.99■■□□□ 1.43
1700020N01RikQ8CF20 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.98■■□□□ 1.43
1700020N01RikQ8CF20 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.97■■□□□ 1.43
1700020N01RikQ8CF20 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
1700020N01RikQ8CF20 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
1700020N01RikQ8CF20 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
1700020N01RikQ8CF20 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
1700020N01RikQ8CF20 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
1700020N01RikQ8CF20 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
1700020N01RikQ8CF20 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
1700020N01RikQ8CF20 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
1700020N01RikQ8CF20 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.92■■□□□ 1.42
1700020N01RikQ8CF20 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
1700020N01RikQ8CF20 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
1700020N01RikQ8CF20 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
1700020N01RikQ8CF20 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
1700020N01RikQ8CF20 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
1700020N01RikQ8CF20 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
1700020N01RikQ8CF20 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
1700020N01RikQ8CF20 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
1700020N01RikQ8CF20 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
1700020N01RikQ8CF20 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.87■■□□□ 1.41
1700020N01RikQ8CF20 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
1700020N01RikQ8CF20 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
1700020N01RikQ8CF20 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
1700020N01RikQ8CF20 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
1700020N01RikQ8CF20 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
1700020N01RikQ8CF20 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.82■■□□□ 1.4
1700020N01RikQ8CF20 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
1700020N01RikQ8CF20 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
1700020N01RikQ8CF20 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.8■■□□□ 1.4
1700020N01RikQ8CF20 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
1700020N01RikQ8CF20 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.79■■□□□ 1.4
1700020N01RikQ8CF20 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
1700020N01RikQ8CF20 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
1700020N01RikQ8CF20 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
1700020N01RikQ8CF20 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
1700020N01RikQ8CF20 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
1700020N01RikQ8CF20 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
1700020N01RikQ8CF20 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
1700020N01RikQ8CF20 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
1700020N01RikQ8CF20 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
1700020N01RikQ8CF20 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
1700020N01RikQ8CF20 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
1700020N01RikQ8CF20 Amer2-203ENSMUST00000225247 2662 ntBASIC23.69■■□□□ 1.38
1700020N01RikQ8CF20 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
1700020N01RikQ8CF20 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
1700020N01RikQ8CF20 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
1700020N01RikQ8CF20 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
1700020N01RikQ8CF20 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
1700020N01RikQ8CF20 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
1700020N01RikQ8CF20 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
1700020N01RikQ8CF20 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
1700020N01RikQ8CF20 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
1700020N01RikQ8CF20 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
1700020N01RikQ8CF20 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
1700020N01RikQ8CF20 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
1700020N01RikQ8CF20 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
1700020N01RikQ8CF20 Gm25262-201ENSMUST00000174934 133 ntBASIC23.56■■□□□ 1.36
1700020N01RikQ8CF20 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
1700020N01RikQ8CF20 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
1700020N01RikQ8CF20 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
1700020N01RikQ8CF20 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
1700020N01RikQ8CF20 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
1700020N01RikQ8CF20 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
1700020N01RikQ8CF20 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
1700020N01RikQ8CF20 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
1700020N01RikQ8CF20 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
1700020N01RikQ8CF20 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
1700020N01RikQ8CF20 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
1700020N01RikQ8CF20 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
1700020N01RikQ8CF20 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
1700020N01RikQ8CF20 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.45■■□□□ 1.34
1700020N01RikQ8CF20 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.44■■□□□ 1.34
1700020N01RikQ8CF20 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms