Protein–RNA interactions for Protein: Q8CDV0

Ccdc178, Coiled-coil domain-containing protein 178, mousemouse

Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc178Q8CDV0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Ccdc178Q8CDV0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.86■■■□□ 2.53
Ccdc178Q8CDV0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Ccdc178Q8CDV0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Ccdc178Q8CDV0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Ccdc178Q8CDV0 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.84■■■□□ 2.53
Ccdc178Q8CDV0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Ccdc178Q8CDV0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Ccdc178Q8CDV0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.82■■■□□ 2.53
Ccdc178Q8CDV0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Ccdc178Q8CDV0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
Ccdc178Q8CDV0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ccdc178Q8CDV0 Mipep-204ENSMUST00000225043 1548 ntBASIC30.81■■■□□ 2.52
Ccdc178Q8CDV0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ccdc178Q8CDV0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ccdc178Q8CDV0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
Ccdc178Q8CDV0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ccdc178Q8CDV0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Ccdc178Q8CDV0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ccdc178Q8CDV0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.75■■■□□ 2.51
Ccdc178Q8CDV0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
Ccdc178Q8CDV0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Ccdc178Q8CDV0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Ccdc178Q8CDV0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
Ccdc178Q8CDV0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Ccdc178Q8CDV0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ccdc178Q8CDV0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.63■■■□□ 2.49
Ccdc178Q8CDV0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Ccdc178Q8CDV0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc178Q8CDV0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc178Q8CDV0 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.61■■■□□ 2.49
Ccdc178Q8CDV0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Ccdc178Q8CDV0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Ccdc178Q8CDV0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Ccdc178Q8CDV0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Ccdc178Q8CDV0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ccdc178Q8CDV0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ccdc178Q8CDV0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
Ccdc178Q8CDV0 Peli2-204ENSMUST00000226513 1320 ntBASIC30.51■■■□□ 2.48
Ccdc178Q8CDV0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc178Q8CDV0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Ccdc178Q8CDV0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ccdc178Q8CDV0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ccdc178Q8CDV0 Gm16148-201ENSMUST00000119653 893 ntBASIC30.45■■■□□ 2.47
Ccdc178Q8CDV0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
Ccdc178Q8CDV0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ccdc178Q8CDV0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.43■■■□□ 2.46
Ccdc178Q8CDV0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
Ccdc178Q8CDV0 Zfp131-205ENSMUST00000223812 663 ntBASIC30.43■■■□□ 2.46
Ccdc178Q8CDV0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Ccdc178Q8CDV0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ccdc178Q8CDV0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.4■■■□□ 2.46
Ccdc178Q8CDV0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.4■■■□□ 2.46
Ccdc178Q8CDV0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ccdc178Q8CDV0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc178Q8CDV0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc178Q8CDV0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc178Q8CDV0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ccdc178Q8CDV0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc178Q8CDV0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc178Q8CDV0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ccdc178Q8CDV0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ccdc178Q8CDV0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.29■■■□□ 2.44
Ccdc178Q8CDV0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.29■■■□□ 2.44
Ccdc178Q8CDV0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.28■■■□□ 2.44
Ccdc178Q8CDV0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Ccdc178Q8CDV0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Ccdc178Q8CDV0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Ccdc178Q8CDV0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.25■■■□□ 2.43
Ccdc178Q8CDV0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Ccdc178Q8CDV0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
Ccdc178Q8CDV0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.22■■■□□ 2.43
Ccdc178Q8CDV0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Ccdc178Q8CDV0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Ccdc178Q8CDV0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Ccdc178Q8CDV0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Ccdc178Q8CDV0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ccdc178Q8CDV0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Ccdc178Q8CDV0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Ccdc178Q8CDV0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Ccdc178Q8CDV0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Ccdc178Q8CDV0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
Ccdc178Q8CDV0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.13■■■□□ 2.41
Ccdc178Q8CDV0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ccdc178Q8CDV0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ccdc178Q8CDV0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ccdc178Q8CDV0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Ccdc178Q8CDV0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ccdc178Q8CDV0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.08■■■□□ 2.41
Ccdc178Q8CDV0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ccdc178Q8CDV0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ccdc178Q8CDV0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ccdc178Q8CDV0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
Ccdc178Q8CDV0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
Ccdc178Q8CDV0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30■■■□□ 2.39
Ccdc178Q8CDV0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30■■■□□ 2.39
Ccdc178Q8CDV0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
Ccdc178Q8CDV0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
Ccdc178Q8CDV0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Ccdc178Q8CDV0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms