Protein–RNA interactions for Protein: Q8BUM3

Ptpn7, Tyrosine-protein phosphatase non-receptor type 7, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn7Q8BUM3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Ptpn7Q8BUM3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ptpn7Q8BUM3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Ptpn7Q8BUM3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Ptpn7Q8BUM3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ptpn7Q8BUM3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.11■■□□□ 1.45
Ptpn7Q8BUM3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Ptpn7Q8BUM3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Ptpn7Q8BUM3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ptpn7Q8BUM3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ptpn7Q8BUM3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Ptpn7Q8BUM3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ptpn7Q8BUM3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ptpn7Q8BUM3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ptpn7Q8BUM3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.06■■□□□ 1.44
Ptpn7Q8BUM3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ptpn7Q8BUM3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ptpn7Q8BUM3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ptpn7Q8BUM3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.01■■□□□ 1.43
Ptpn7Q8BUM3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ptpn7Q8BUM3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ptpn7Q8BUM3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Ptpn7Q8BUM3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.98■■□□□ 1.43
Ptpn7Q8BUM3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ptpn7Q8BUM3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ptpn7Q8BUM3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ptpn7Q8BUM3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ptpn7Q8BUM3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Ptpn7Q8BUM3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ptpn7Q8BUM3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ptpn7Q8BUM3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
Ptpn7Q8BUM3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Ptpn7Q8BUM3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.94■■□□□ 1.42
Ptpn7Q8BUM3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ptpn7Q8BUM3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ptpn7Q8BUM3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ptpn7Q8BUM3 Gm27322-201ENSMUST00000184007 104 ntBASIC23.89■■□□□ 1.41
Ptpn7Q8BUM3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
Ptpn7Q8BUM3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.89■■□□□ 1.41
Ptpn7Q8BUM3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Ptpn7Q8BUM3 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.88■■□□□ 1.41
Ptpn7Q8BUM3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.87■■□□□ 1.41
Ptpn7Q8BUM3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ptpn7Q8BUM3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ptpn7Q8BUM3 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.84■■□□□ 1.41
Ptpn7Q8BUM3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
Ptpn7Q8BUM3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ptpn7Q8BUM3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
Ptpn7Q8BUM3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptpn7Q8BUM3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.8■■□□□ 1.4
Ptpn7Q8BUM3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ptpn7Q8BUM3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ptpn7Q8BUM3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ptpn7Q8BUM3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ptpn7Q8BUM3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ptpn7Q8BUM3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ptpn7Q8BUM3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ptpn7Q8BUM3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ptpn7Q8BUM3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ptpn7Q8BUM3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ptpn7Q8BUM3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ptpn7Q8BUM3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ptpn7Q8BUM3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ptpn7Q8BUM3 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Ptpn7Q8BUM3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ptpn7Q8BUM3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ptpn7Q8BUM3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ptpn7Q8BUM3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ptpn7Q8BUM3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ptpn7Q8BUM3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.69■■□□□ 1.38
Ptpn7Q8BUM3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Ptpn7Q8BUM3 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ptpn7Q8BUM3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Ptpn7Q8BUM3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ptpn7Q8BUM3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
Ptpn7Q8BUM3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.64■■□□□ 1.37
Ptpn7Q8BUM3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptpn7Q8BUM3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptpn7Q8BUM3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptpn7Q8BUM3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptpn7Q8BUM3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptpn7Q8BUM3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ptpn7Q8BUM3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ptpn7Q8BUM3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Ptpn7Q8BUM3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Ptpn7Q8BUM3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ptpn7Q8BUM3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ptpn7Q8BUM3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Ptpn7Q8BUM3 Zxda-201ENSMUST00000117281 2621 ntBASIC23.57■■□□□ 1.36
Ptpn7Q8BUM3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.56■■□□□ 1.36
Ptpn7Q8BUM3 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.56■■□□□ 1.36
Ptpn7Q8BUM3 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.53■■□□□ 1.36
Ptpn7Q8BUM3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Ptpn7Q8BUM3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ptpn7Q8BUM3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ptpn7Q8BUM3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ptpn7Q8BUM3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Ptpn7Q8BUM3 Gm26115-201ENSMUST00000175605 87 ntBASIC23.51■■□□□ 1.35
Ptpn7Q8BUM3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Ptpn7Q8BUM3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms