Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Suds3Q8BR65 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Suds3Q8BR65 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Suds3Q8BR65 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.39■■□□□ 1.82
Suds3Q8BR65 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Suds3Q8BR65 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Suds3Q8BR65 Gm24804-201ENSMUST00000174982 85 ntBASIC26.38■■□□□ 1.81
Suds3Q8BR65 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Suds3Q8BR65 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Suds3Q8BR65 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.36■■□□□ 1.81
Suds3Q8BR65 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.35■■□□□ 1.81
Suds3Q8BR65 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Suds3Q8BR65 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Suds3Q8BR65 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.32■■□□□ 1.8
Suds3Q8BR65 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.32■■□□□ 1.8
Suds3Q8BR65 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Suds3Q8BR65 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Suds3Q8BR65 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Suds3Q8BR65 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.26■■□□□ 1.79
Suds3Q8BR65 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Suds3Q8BR65 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Suds3Q8BR65 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Suds3Q8BR65 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.21■■□□□ 1.79
Suds3Q8BR65 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Suds3Q8BR65 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Suds3Q8BR65 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Suds3Q8BR65 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Suds3Q8BR65 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Suds3Q8BR65 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Suds3Q8BR65 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Suds3Q8BR65 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.11■■□□□ 1.77
Suds3Q8BR65 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Suds3Q8BR65 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Suds3Q8BR65 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Suds3Q8BR65 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Suds3Q8BR65 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Suds3Q8BR65 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Suds3Q8BR65 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.05■■□□□ 1.76
Suds3Q8BR65 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.04■■□□□ 1.76
Suds3Q8BR65 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Suds3Q8BR65 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Suds3Q8BR65 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Suds3Q8BR65 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Suds3Q8BR65 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Suds3Q8BR65 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Suds3Q8BR65 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Suds3Q8BR65 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Suds3Q8BR65 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Suds3Q8BR65 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Suds3Q8BR65 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Suds3Q8BR65 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Suds3Q8BR65 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Suds3Q8BR65 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Suds3Q8BR65 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Suds3Q8BR65 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Suds3Q8BR65 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Suds3Q8BR65 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Suds3Q8BR65 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Suds3Q8BR65 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Suds3Q8BR65 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
Suds3Q8BR65 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
Suds3Q8BR65 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Suds3Q8BR65 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.83■■□□□ 1.73
Suds3Q8BR65 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Suds3Q8BR65 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Suds3Q8BR65 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
Suds3Q8BR65 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Suds3Q8BR65 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Suds3Q8BR65 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Suds3Q8BR65 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Suds3Q8BR65 Peli2-204ENSMUST00000226513 1320 ntBASIC25.78■■□□□ 1.72
Suds3Q8BR65 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Suds3Q8BR65 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Suds3Q8BR65 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Suds3Q8BR65 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Suds3Q8BR65 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Suds3Q8BR65 Gm16148-201ENSMUST00000119653 893 ntBASIC25.74■■□□□ 1.71
Suds3Q8BR65 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Suds3Q8BR65 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.73■■□□□ 1.71
Suds3Q8BR65 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Suds3Q8BR65 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Suds3Q8BR65 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Suds3Q8BR65 Zxda-201ENSMUST00000117281 2621 ntBASIC25.72■■□□□ 1.71
Suds3Q8BR65 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.71■■□□□ 1.71
Suds3Q8BR65 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
Suds3Q8BR65 Zfp131-205ENSMUST00000223812 663 ntBASIC25.7■■□□□ 1.7
Suds3Q8BR65 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.69■■□□□ 1.7
Suds3Q8BR65 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Suds3Q8BR65 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.66■■□□□ 1.7
Suds3Q8BR65 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.66■■□□□ 1.7
Suds3Q8BR65 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Suds3Q8BR65 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Suds3Q8BR65 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Suds3Q8BR65 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Suds3Q8BR65 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Suds3Q8BR65 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
Suds3Q8BR65 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Suds3Q8BR65 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Suds3Q8BR65 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
Suds3Q8BR65 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms