Protein–RNA interactions for Protein: Q8BQN5

Fam78b, Protein FAM78B, mousemouse

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78bQ8BQN5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Fam78bQ8BQN5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Fam78bQ8BQN5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fam78bQ8BQN5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Fam78bQ8BQN5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam78bQ8BQN5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam78bQ8BQN5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Fam78bQ8BQN5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fam78bQ8BQN5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Fam78bQ8BQN5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Fam78bQ8BQN5 Rab21-202ENSMUST00000218831 843 ntBASIC20.5■□□□□ 0.87
Fam78bQ8BQN5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fam78bQ8BQN5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Fam78bQ8BQN5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam78bQ8BQN5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam78bQ8BQN5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fam78bQ8BQN5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fam78bQ8BQN5 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.47■□□□□ 0.87
Fam78bQ8BQN5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam78bQ8BQN5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fam78bQ8BQN5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Fam78bQ8BQN5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Fam78bQ8BQN5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Fam78bQ8BQN5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Fam78bQ8BQN5 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.41■□□□□ 0.86
Fam78bQ8BQN5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Fam78bQ8BQN5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Fam78bQ8BQN5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Fam78bQ8BQN5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Fam78bQ8BQN5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.39■□□□□ 0.85
Fam78bQ8BQN5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.39■□□□□ 0.85
Fam78bQ8BQN5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.38■□□□□ 0.85
Fam78bQ8BQN5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Fam78bQ8BQN5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Fam78bQ8BQN5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Fam78bQ8BQN5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fam78bQ8BQN5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fam78bQ8BQN5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fam78bQ8BQN5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Fam78bQ8BQN5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Fam78bQ8BQN5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Fam78bQ8BQN5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam78bQ8BQN5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Fam78bQ8BQN5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam78bQ8BQN5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam78bQ8BQN5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam78bQ8BQN5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam78bQ8BQN5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Fam78bQ8BQN5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Fam78bQ8BQN5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Fam78bQ8BQN5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Fam78bQ8BQN5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam78bQ8BQN5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Fam78bQ8BQN5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Fam78bQ8BQN5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Fam78bQ8BQN5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fam78bQ8BQN5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fam78bQ8BQN5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fam78bQ8BQN5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fam78bQ8BQN5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fam78bQ8BQN5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Fam78bQ8BQN5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam78bQ8BQN5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
Fam78bQ8BQN5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam78bQ8BQN5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Fam78bQ8BQN5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.2■□□□□ 0.82
Fam78bQ8BQN5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fam78bQ8BQN5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Fam78bQ8BQN5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Fam78bQ8BQN5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
Fam78bQ8BQN5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.17■□□□□ 0.82
Fam78bQ8BQN5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam78bQ8BQN5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam78bQ8BQN5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam78bQ8BQN5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam78bQ8BQN5 Gm25262-201ENSMUST00000174934 133 ntBASIC20.15■□□□□ 0.82
Fam78bQ8BQN5 Mipep-204ENSMUST00000225043 1548 ntBASIC20.15■□□□□ 0.82
Fam78bQ8BQN5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Fam78bQ8BQN5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam78bQ8BQN5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fam78bQ8BQN5 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.12■□□□□ 0.81
Fam78bQ8BQN5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Fam78bQ8BQN5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Fam78bQ8BQN5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Fam78bQ8BQN5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Fam78bQ8BQN5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.1■□□□□ 0.81
Fam78bQ8BQN5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fam78bQ8BQN5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fam78bQ8BQN5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Fam78bQ8BQN5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Fam78bQ8BQN5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Fam78bQ8BQN5 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.07■□□□□ 0.8
Fam78bQ8BQN5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Fam78bQ8BQN5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Fam78bQ8BQN5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fam78bQ8BQN5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Fam78bQ8BQN5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam78bQ8BQN5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Fam78bQ8BQN5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Fam78bQ8BQN5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms