Protein–RNA interactions for Protein: Q6P2K6

Ppp4r3a, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r3aQ6P2K6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32,32■■■□□ 2,76
Ppp4r3aQ6P2K6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32,32■■■□□ 2,76
Ppp4r3aQ6P2K6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32,32■■■□□ 2,76
Ppp4r3aQ6P2K6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32,3■■■□□ 2,76
Ppp4r3aQ6P2K6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32,3■■■□□ 2,76
Ppp4r3aQ6P2K6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC32,29■■■□□ 2,76
Ppp4r3aQ6P2K6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32,28■■■□□ 2,76
Ppp4r3aQ6P2K6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32,28■■■□□ 2,76
Ppp4r3aQ6P2K6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC32,27■■■□□ 2,76
Ppp4r3aQ6P2K6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC32,26■■■□□ 2,76
Ppp4r3aQ6P2K6 Peli2-204ENSMUST00000226513 1320 ntBASIC32,26■■■□□ 2,75
Ppp4r3aQ6P2K6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32,24■■■□□ 2,75
Ppp4r3aQ6P2K6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC32,22■■■□□ 2,75
Ppp4r3aQ6P2K6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC32,22■■■□□ 2,75
Ppp4r3aQ6P2K6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32,2■■■□□ 2,75
Ppp4r3aQ6P2K6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32,18■■■□□ 2,74
Ppp4r3aQ6P2K6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC32,18■■■□□ 2,74
Ppp4r3aQ6P2K6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32,17■■■□□ 2,74
Ppp4r3aQ6P2K6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC32,16■■■□□ 2,74
Ppp4r3aQ6P2K6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC32,15■■■□□ 2,74
Ppp4r3aQ6P2K6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32,15■■■□□ 2,74
Ppp4r3aQ6P2K6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32,14■■■□□ 2,74
Ppp4r3aQ6P2K6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC32,14■■■□□ 2,74
Ppp4r3aQ6P2K6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC32,13■■■□□ 2,73
Ppp4r3aQ6P2K6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32,11■■■□□ 2,73
Ppp4r3aQ6P2K6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC32,07■■■□□ 2,72
Ppp4r3aQ6P2K6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC32,06■■■□□ 2,72
Ppp4r3aQ6P2K6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32,04■■■□□ 2,72
Ppp4r3aQ6P2K6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC32,03■■■□□ 2,72
Ppp4r3aQ6P2K6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC32,02■■■□□ 2,72
Ppp4r3aQ6P2K6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC32■■■□□ 2,71
Ppp4r3aQ6P2K6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2,71
Ppp4r3aQ6P2K6 Gm16148-201ENSMUST00000119653 893 ntBASIC31,99■■■□□ 2,71
Ppp4r3aQ6P2K6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31,96■■■□□ 2,71
Ppp4r3aQ6P2K6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31,96■■■□□ 2,71
Ppp4r3aQ6P2K6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31,93■■■□□ 2,7
Ppp4r3aQ6P2K6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31,92■■■□□ 2,7
Ppp4r3aQ6P2K6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31,89■■■□□ 2,7
Ppp4r3aQ6P2K6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31,89■■■□□ 2,7
Ppp4r3aQ6P2K6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31,88■■■□□ 2,69
Ppp4r3aQ6P2K6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31,86■■■□□ 2,69
Ppp4r3aQ6P2K6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31,86■■■□□ 2,69
Ppp4r3aQ6P2K6 Gm2415-204ENSMUST00000190235 2004 ntBASIC31,85■■■□□ 2,69
Ppp4r3aQ6P2K6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31,84■■■□□ 2,69
Ppp4r3aQ6P2K6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31,84■■■□□ 2,69
Ppp4r3aQ6P2K6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31,83■■■□□ 2,69
Ppp4r3aQ6P2K6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31,81■■■□□ 2,68
Ppp4r3aQ6P2K6 Zfp131-205ENSMUST00000223812 663 ntBASIC31,81■■■□□ 2,68
Ppp4r3aQ6P2K6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31,8■■■□□ 2,68
Ppp4r3aQ6P2K6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31,79■■■□□ 2,68
Ppp4r3aQ6P2K6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31,78■■■□□ 2,68
Ppp4r3aQ6P2K6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31,78■■■□□ 2,68
Ppp4r3aQ6P2K6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31,77■■■□□ 2,68
Ppp4r3aQ6P2K6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31,76■■■□□ 2,67
Ppp4r3aQ6P2K6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31,75■■■□□ 2,67
Ppp4r3aQ6P2K6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31,72■■■□□ 2,67
Ppp4r3aQ6P2K6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31,71■■■□□ 2,67
Ppp4r3aQ6P2K6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31,71■■■□□ 2,67
Ppp4r3aQ6P2K6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31,7■■■□□ 2,67
Ppp4r3aQ6P2K6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31,69■■■□□ 2,66
Ppp4r3aQ6P2K6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31,68■■■□□ 2,66
Ppp4r3aQ6P2K6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31,68■■■□□ 2,66
Ppp4r3aQ6P2K6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31,67■■■□□ 2,66
Ppp4r3aQ6P2K6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31,65■■■□□ 2,66
Ppp4r3aQ6P2K6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31,65■■■□□ 2,66
Ppp4r3aQ6P2K6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31,64■■■□□ 2,66
Ppp4r3aQ6P2K6 Gm6658-202ENSMUST00000209493 1885 ntBASIC31,62■■■□□ 2,65
Ppp4r3aQ6P2K6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31,62■■■□□ 2,65
Ppp4r3aQ6P2K6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31,6■■■□□ 2,65
Ppp4r3aQ6P2K6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31,59■■■□□ 2,65
Ppp4r3aQ6P2K6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31,58■■■□□ 2,65
Ppp4r3aQ6P2K6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31,58■■■□□ 2,65
Ppp4r3aQ6P2K6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31,58■■■□□ 2,65
Ppp4r3aQ6P2K6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31,58■■■□□ 2,65
Ppp4r3aQ6P2K6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31,57■■■□□ 2,64
Ppp4r3aQ6P2K6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31,54■■■□□ 2,64
Ppp4r3aQ6P2K6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31,54■■■□□ 2,64
Ppp4r3aQ6P2K6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31,53■■■□□ 2,64
Ppp4r3aQ6P2K6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31,52■■■□□ 2,64
Ppp4r3aQ6P2K6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31,51■■■□□ 2,63
Ppp4r3aQ6P2K6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31,5■■■□□ 2,63
Ppp4r3aQ6P2K6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31,5■■■□□ 2,63
Ppp4r3aQ6P2K6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC31,49■■■□□ 2,63
Ppp4r3aQ6P2K6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31,48■■■□□ 2,63
Ppp4r3aQ6P2K6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31,48■■■□□ 2,63
Ppp4r3aQ6P2K6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC31,46■■■□□ 2,63
Ppp4r3aQ6P2K6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31,46■■■□□ 2,63
Ppp4r3aQ6P2K6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31,43■■■□□ 2,62
Ppp4r3aQ6P2K6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31,43■■■□□ 2,62
Ppp4r3aQ6P2K6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31,43■■■□□ 2,62
Ppp4r3aQ6P2K6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31,42■■■□□ 2,62
Ppp4r3aQ6P2K6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31,42■■■□□ 2,62
Ppp4r3aQ6P2K6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31,41■■■□□ 2,62
Ppp4r3aQ6P2K6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC31,41■■■□□ 2,62
Ppp4r3aQ6P2K6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC31,41■■■□□ 2,62
Ppp4r3aQ6P2K6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31,4■■■□□ 2,62
Ppp4r3aQ6P2K6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31,39■■■□□ 2,62
Ppp4r3aQ6P2K6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31,39■■■□□ 2,62
Ppp4r3aQ6P2K6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31,37■■■□□ 2,61
Ppp4r3aQ6P2K6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31,35■■■□□ 2,61
Retrieved 100 of 76,532 protein–RNA pairs in 60,2 ms