Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ndufa4Q62425 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ndufa4Q62425 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ndufa4Q62425 Gm25238-201ENSMUST00000174914 89 ntBASIC18.7■□□□□ 0.58
Ndufa4Q62425 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ndufa4Q62425 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ndufa4Q62425 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndufa4Q62425 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ndufa4Q62425 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndufa4Q62425 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndufa4Q62425 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndufa4Q62425 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.66■□□□□ 0.58
Ndufa4Q62425 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndufa4Q62425 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndufa4Q62425 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ndufa4Q62425 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ndufa4Q62425 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ndufa4Q62425 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ndufa4Q62425 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.64■□□□□ 0.57
Ndufa4Q62425 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ndufa4Q62425 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ndufa4Q62425 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ndufa4Q62425 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ndufa4Q62425 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndufa4Q62425 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndufa4Q62425 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.6■□□□□ 0.57
Ndufa4Q62425 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ndufa4Q62425 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndufa4Q62425 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ndufa4Q62425 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ndufa4Q62425 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Ndufa4Q62425 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ndufa4Q62425 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ndufa4Q62425 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ndufa4Q62425 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ndufa4Q62425 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ndufa4Q62425 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ndufa4Q62425 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndufa4Q62425 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.55■□□□□ 0.56
Ndufa4Q62425 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndufa4Q62425 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.55■□□□□ 0.56
Ndufa4Q62425 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ndufa4Q62425 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ndufa4Q62425 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ndufa4Q62425 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
Ndufa4Q62425 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.53■□□□□ 0.56
Ndufa4Q62425 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ndufa4Q62425 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ndufa4Q62425 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ndufa4Q62425 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ndufa4Q62425 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ndufa4Q62425 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ndufa4Q62425 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ndufa4Q62425 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ndufa4Q62425 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
Ndufa4Q62425 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ndufa4Q62425 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.47■□□□□ 0.55
Ndufa4Q62425 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ndufa4Q62425 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ndufa4Q62425 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ndufa4Q62425 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ndufa4Q62425 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ndufa4Q62425 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Ndufa4Q62425 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Ndufa4Q62425 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ndufa4Q62425 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ndufa4Q62425 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ndufa4Q62425 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ndufa4Q62425 Mipep-204ENSMUST00000225043 1548 ntBASIC18.43■□□□□ 0.54
Ndufa4Q62425 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ndufa4Q62425 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ndufa4Q62425 Rab21-202ENSMUST00000218831 843 ntBASIC18.42■□□□□ 0.54
Ndufa4Q62425 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ndufa4Q62425 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ndufa4Q62425 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ndufa4Q62425 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ndufa4Q62425 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ndufa4Q62425 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ndufa4Q62425 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ndufa4Q62425 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ndufa4Q62425 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ndufa4Q62425 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.35■□□□□ 0.53
Ndufa4Q62425 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Ndufa4Q62425 Amer2-203ENSMUST00000225247 2662 ntBASIC18.34■□□□□ 0.53
Ndufa4Q62425 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ndufa4Q62425 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ndufa4Q62425 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ndufa4Q62425 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ndufa4Q62425 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.29■□□□□ 0.52
Ndufa4Q62425 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ndufa4Q62425 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ndufa4Q62425 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Ndufa4Q62425 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Ndufa4Q62425 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ndufa4Q62425 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.27■□□□□ 0.51
Ndufa4Q62425 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ndufa4Q62425 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.25■□□□□ 0.51
Ndufa4Q62425 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.24■□□□□ 0.51
Ndufa4Q62425 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ndufa4Q62425 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms