Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ndufa4Q62425 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ndufa4Q62425 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ndufa4Q62425 Gm25238-201ENSMUST00000174914 89 ntBASIC18.7■□□□□ 0.58
Ndufa4Q62425 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ndufa4Q62425 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ndufa4Q62425 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ndufa4Q62425 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ndufa4Q62425 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ndufa4Q62425 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndufa4Q62425 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndufa4Q62425 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.66■□□□□ 0.58
Ndufa4Q62425 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndufa4Q62425 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ndufa4Q62425 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ndufa4Q62425 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ndufa4Q62425 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ndufa4Q62425 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ndufa4Q62425 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.64■□□□□ 0.57
Ndufa4Q62425 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ndufa4Q62425 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ndufa4Q62425 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ndufa4Q62425 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ndufa4Q62425 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndufa4Q62425 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndufa4Q62425 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.6■□□□□ 0.57
Ndufa4Q62425 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ndufa4Q62425 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ndufa4Q62425 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ndufa4Q62425 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ndufa4Q62425 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Ndufa4Q62425 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ndufa4Q62425 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ndufa4Q62425 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ndufa4Q62425 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ndufa4Q62425 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ndufa4Q62425 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ndufa4Q62425 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndufa4Q62425 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.55■□□□□ 0.56
Ndufa4Q62425 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ndufa4Q62425 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.55■□□□□ 0.56
Ndufa4Q62425 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ndufa4Q62425 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ndufa4Q62425 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ndufa4Q62425 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
Ndufa4Q62425 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.53■□□□□ 0.56
Ndufa4Q62425 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ndufa4Q62425 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ndufa4Q62425 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ndufa4Q62425 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ndufa4Q62425 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ndufa4Q62425 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ndufa4Q62425 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ndufa4Q62425 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ndufa4Q62425 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
Ndufa4Q62425 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ndufa4Q62425 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.47■□□□□ 0.55
Ndufa4Q62425 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ndufa4Q62425 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ndufa4Q62425 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ndufa4Q62425 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ndufa4Q62425 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ndufa4Q62425 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Ndufa4Q62425 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Ndufa4Q62425 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ndufa4Q62425 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ndufa4Q62425 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ndufa4Q62425 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ndufa4Q62425 Mipep-204ENSMUST00000225043 1548 ntBASIC18.43■□□□□ 0.54
Ndufa4Q62425 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ndufa4Q62425 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ndufa4Q62425 Rab21-202ENSMUST00000218831 843 ntBASIC18.42■□□□□ 0.54
Ndufa4Q62425 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ndufa4Q62425 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ndufa4Q62425 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ndufa4Q62425 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ndufa4Q62425 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ndufa4Q62425 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ndufa4Q62425 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ndufa4Q62425 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ndufa4Q62425 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ndufa4Q62425 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.35■□□□□ 0.53
Ndufa4Q62425 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Ndufa4Q62425 Amer2-203ENSMUST00000225247 2662 ntBASIC18.34■□□□□ 0.53
Ndufa4Q62425 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ndufa4Q62425 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ndufa4Q62425 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ndufa4Q62425 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ndufa4Q62425 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.29■□□□□ 0.52
Ndufa4Q62425 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ndufa4Q62425 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ndufa4Q62425 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Ndufa4Q62425 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Ndufa4Q62425 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ndufa4Q62425 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.27■□□□□ 0.51
Ndufa4Q62425 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ndufa4Q62425 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.25■□□□□ 0.51
Ndufa4Q62425 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.24■□□□□ 0.51
Ndufa4Q62425 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ndufa4Q62425 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms