Protein–RNA interactions for Protein: Q61239

Fnta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FntaQ61239 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
FntaQ61239 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■■□□ 2
FntaQ61239 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.51■■□□□ 1.99
FntaQ61239 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
FntaQ61239 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
FntaQ61239 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
FntaQ61239 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
FntaQ61239 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
FntaQ61239 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
FntaQ61239 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
FntaQ61239 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
FntaQ61239 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
FntaQ61239 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.46■■□□□ 1.99
FntaQ61239 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
FntaQ61239 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
FntaQ61239 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
FntaQ61239 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
FntaQ61239 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
FntaQ61239 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
FntaQ61239 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
FntaQ61239 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.36■■□□□ 1.97
FntaQ61239 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
FntaQ61239 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
FntaQ61239 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
FntaQ61239 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.33■■□□□ 1.97
FntaQ61239 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
FntaQ61239 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
FntaQ61239 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
FntaQ61239 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.3■■□□□ 1.96
FntaQ61239 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
FntaQ61239 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
FntaQ61239 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
FntaQ61239 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
FntaQ61239 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
FntaQ61239 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
FntaQ61239 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
FntaQ61239 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
FntaQ61239 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
FntaQ61239 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.21■■□□□ 1.95
FntaQ61239 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
FntaQ61239 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
FntaQ61239 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
FntaQ61239 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
FntaQ61239 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
FntaQ61239 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
FntaQ61239 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
FntaQ61239 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
FntaQ61239 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
FntaQ61239 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
FntaQ61239 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
FntaQ61239 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
FntaQ61239 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.12■■□□□ 1.93
FntaQ61239 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
FntaQ61239 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
FntaQ61239 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
FntaQ61239 Mipep-204ENSMUST00000225043 1548 ntBASIC27.1■■□□□ 1.93
FntaQ61239 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
FntaQ61239 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
FntaQ61239 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
FntaQ61239 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
FntaQ61239 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
FntaQ61239 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.92
FntaQ61239 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
FntaQ61239 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
FntaQ61239 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
FntaQ61239 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
FntaQ61239 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
FntaQ61239 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
FntaQ61239 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
FntaQ61239 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
FntaQ61239 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.03■■□□□ 1.92
FntaQ61239 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
FntaQ61239 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
FntaQ61239 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.02■■□□□ 1.92
FntaQ61239 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
FntaQ61239 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
FntaQ61239 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
FntaQ61239 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
FntaQ61239 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
FntaQ61239 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
FntaQ61239 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
FntaQ61239 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.89■■□□□ 1.9
FntaQ61239 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
FntaQ61239 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
FntaQ61239 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
FntaQ61239 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
FntaQ61239 Amer2-203ENSMUST00000225247 2662 ntBASIC26.86■■□□□ 1.89
FntaQ61239 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
FntaQ61239 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
FntaQ61239 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
FntaQ61239 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
FntaQ61239 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
FntaQ61239 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
FntaQ61239 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.81■■□□□ 1.88
FntaQ61239 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
FntaQ61239 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
FntaQ61239 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
FntaQ61239 Gm25262-201ENSMUST00000174934 133 ntBASIC26.78■■□□□ 1.88
FntaQ61239 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
FntaQ61239 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms