Protein–RNA interactions for Protein: Q61239

Fnta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FntaQ61239 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
FntaQ61239 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■■□□ 2
FntaQ61239 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.51■■□□□ 1.99
FntaQ61239 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
FntaQ61239 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
FntaQ61239 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
FntaQ61239 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
FntaQ61239 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
FntaQ61239 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
FntaQ61239 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
FntaQ61239 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
FntaQ61239 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
FntaQ61239 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.46■■□□□ 1.99
FntaQ61239 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
FntaQ61239 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
FntaQ61239 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
FntaQ61239 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
FntaQ61239 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
FntaQ61239 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
FntaQ61239 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
FntaQ61239 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.36■■□□□ 1.97
FntaQ61239 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
FntaQ61239 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
FntaQ61239 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
FntaQ61239 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.33■■□□□ 1.97
FntaQ61239 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
FntaQ61239 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
FntaQ61239 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
FntaQ61239 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.3■■□□□ 1.96
FntaQ61239 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
FntaQ61239 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
FntaQ61239 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
FntaQ61239 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
FntaQ61239 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
FntaQ61239 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
FntaQ61239 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
FntaQ61239 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
FntaQ61239 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
FntaQ61239 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.21■■□□□ 1.95
FntaQ61239 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
FntaQ61239 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
FntaQ61239 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
FntaQ61239 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
FntaQ61239 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
FntaQ61239 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
FntaQ61239 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
FntaQ61239 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
FntaQ61239 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
FntaQ61239 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
FntaQ61239 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
FntaQ61239 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
FntaQ61239 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.12■■□□□ 1.93
FntaQ61239 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
FntaQ61239 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
FntaQ61239 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
FntaQ61239 Mipep-204ENSMUST00000225043 1548 ntBASIC27.1■■□□□ 1.93
FntaQ61239 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
FntaQ61239 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
FntaQ61239 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
FntaQ61239 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
FntaQ61239 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
FntaQ61239 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.92
FntaQ61239 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
FntaQ61239 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
FntaQ61239 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
FntaQ61239 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
FntaQ61239 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
FntaQ61239 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
FntaQ61239 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
FntaQ61239 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
FntaQ61239 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.03■■□□□ 1.92
FntaQ61239 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
FntaQ61239 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
FntaQ61239 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.02■■□□□ 1.92
FntaQ61239 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
FntaQ61239 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
FntaQ61239 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
FntaQ61239 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
FntaQ61239 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
FntaQ61239 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
FntaQ61239 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
FntaQ61239 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.89■■□□□ 1.9
FntaQ61239 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
FntaQ61239 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
FntaQ61239 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
FntaQ61239 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
FntaQ61239 Amer2-203ENSMUST00000225247 2662 ntBASIC26.86■■□□□ 1.89
FntaQ61239 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
FntaQ61239 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
FntaQ61239 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
FntaQ61239 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
FntaQ61239 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
FntaQ61239 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
FntaQ61239 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.81■■□□□ 1.88
FntaQ61239 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
FntaQ61239 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
FntaQ61239 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
FntaQ61239 Gm25262-201ENSMUST00000174934 133 ntBASIC26.78■■□□□ 1.88
FntaQ61239 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
FntaQ61239 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms