Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
NfkbibQ60778 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC32.21■■■□□ 2.75
NfkbibQ60778 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
NfkbibQ60778 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
NfkbibQ60778 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32.2■■■□□ 2.75
NfkbibQ60778 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
NfkbibQ60778 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
NfkbibQ60778 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
NfkbibQ60778 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
NfkbibQ60778 Peli2-204ENSMUST00000226513 1320 ntBASIC32.15■■■□□ 2.74
NfkbibQ60778 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
NfkbibQ60778 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
NfkbibQ60778 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
NfkbibQ60778 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
NfkbibQ60778 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
NfkbibQ60778 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
NfkbibQ60778 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
NfkbibQ60778 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
NfkbibQ60778 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
NfkbibQ60778 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC32.03■■■□□ 2.72
NfkbibQ60778 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC32.03■■■□□ 2.72
NfkbibQ60778 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
NfkbibQ60778 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32.01■■■□□ 2.71
NfkbibQ60778 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
NfkbibQ60778 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
NfkbibQ60778 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.97■■■□□ 2.71
NfkbibQ60778 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
NfkbibQ60778 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31.94■■■□□ 2.7
NfkbibQ60778 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
NfkbibQ60778 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
NfkbibQ60778 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
NfkbibQ60778 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
NfkbibQ60778 Gm16148-201ENSMUST00000119653 893 ntBASIC31.85■■■□□ 2.69
NfkbibQ60778 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
NfkbibQ60778 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.82■■■□□ 2.68
NfkbibQ60778 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
NfkbibQ60778 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
NfkbibQ60778 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
NfkbibQ60778 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
NfkbibQ60778 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
NfkbibQ60778 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
NfkbibQ60778 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.75■■■□□ 2.67
NfkbibQ60778 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
NfkbibQ60778 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
NfkbibQ60778 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.74■■■□□ 2.67
NfkbibQ60778 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
NfkbibQ60778 Zfp131-205ENSMUST00000223812 663 ntBASIC31.73■■■□□ 2.67
NfkbibQ60778 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
NfkbibQ60778 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
NfkbibQ60778 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
NfkbibQ60778 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
NfkbibQ60778 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.65■■■□□ 2.66
NfkbibQ60778 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
NfkbibQ60778 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
NfkbibQ60778 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
NfkbibQ60778 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
NfkbibQ60778 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
NfkbibQ60778 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
NfkbibQ60778 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.59■■■□□ 2.65
NfkbibQ60778 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
NfkbibQ60778 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
NfkbibQ60778 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
NfkbibQ60778 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.55■■■□□ 2.64
NfkbibQ60778 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.52■■■□□ 2.64
NfkbibQ60778 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
NfkbibQ60778 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
NfkbibQ60778 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.49■■■□□ 2.63
NfkbibQ60778 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31.49■■■□□ 2.63
NfkbibQ60778 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
NfkbibQ60778 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.48■■■□□ 2.63
NfkbibQ60778 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
NfkbibQ60778 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
NfkbibQ60778 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.46■■■□□ 2.63
NfkbibQ60778 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.46■■■□□ 2.63
NfkbibQ60778 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.44■■■□□ 2.62
NfkbibQ60778 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.43■■■□□ 2.62
NfkbibQ60778 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
NfkbibQ60778 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NfkbibQ60778 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
NfkbibQ60778 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31.42■■■□□ 2.62
NfkbibQ60778 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.39■■■□□ 2.62
NfkbibQ60778 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
NfkbibQ60778 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
NfkbibQ60778 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
NfkbibQ60778 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
NfkbibQ60778 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.35■■■□□ 2.61
NfkbibQ60778 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
NfkbibQ60778 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
NfkbibQ60778 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
NfkbibQ60778 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
NfkbibQ60778 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
NfkbibQ60778 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
NfkbibQ60778 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NfkbibQ60778 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
NfkbibQ60778 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
NfkbibQ60778 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
NfkbibQ60778 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.26■■■□□ 2.59
NfkbibQ60778 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
NfkbibQ60778 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31.25■■■□□ 2.59
NfkbibQ60778 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms